Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_028899.1 Length=222888 Score E Sequences producing significant alignments: (Bits) Value seq8236 127 3e-24 >seq8236 Length=1934 Score = 127 bits (140), Expect = 3e-24 Identities = 184/260 (71%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 102572 CTCTGGAACCACATCGCCTGCACGTCGGACAACGACCTTATCGCCGATTCGCAGATCTTT 102631 ||| |||| ||| ||||| || || || || | ||| | |||||||| || | || || Sbjct 1869 CTCGGGAATCACGTCGCCGGCGCGCCGCACGATCACCGTGTCGCCGATACGGATGTCCTT 1810 Query 102632 ACGCCGGATCTCGTCTTCGTTATGCAGTGTTGCGTTGGAAACCCACACACCGCCTACGAA 102691 ||||| | ||||||||||| ||||| || ||||||| ||| | | ||||| ||||| Sbjct 1809 GCGCCGCACTTCGTCTTCGTTGTGCAGCGTGGCGTTGGTCACCGTCGCGCCGCCGACGAA 1750 Query 102692 AACGGGCTCTAAGCGGCCCACTGGAGTAATGGCCCCCGTTCTACCTACTTGAACATCGAT 102751 || ||||| | || |||| || ||||| || ||||| | || || ||||| ||||| Sbjct 1749 CACCGGCTCGAGCCGCGCCACGGGCGTAATCGCGCCCGTGCGGCCCACCTGAACGTCGAT 1690 Query 102752 CGCCTCCAGCGTCGTTACAGCCTCTTCTGCGGGGAACTTCCATGCGATCATGAAACGCGG 102811 ||| ||| |||| | || || | || |||||||| |||| | ||| ||||| Sbjct 1689 GGCCAGAAGCTTCGTGAGCGCTTCCTGGGCCGGGAACTTGTGCGCGAGCGCGAAGCGCGG 1630 Query 102812 TGCTCTGGCTACGAAACCGA 102831 || | | ||||| |||| Sbjct 1629 CGCACGCGAGACGAAGCCGA 1610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712492415656960