Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30]
69,687 sequences; 205,175,886 total letters
Query= NC_028906.1
Length=75933
Score E
Sequences producing significant alignments: (Bits) Value
seq5777 260 7e-65
>seq5777
Length=3561
Score = 260 bits (288), Expect = 7e-65
Identities = 497/727 (68%), Gaps = 19/727 (3%)
Strand=Plus/Plus
Query 66471 CCACCGGCTCTATCGCTCTGGACGGCGCCCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 66530
||||||| || ||| || ||| ||| || ||| | || || | ||| | |||||||
Sbjct 837 CCACCGGTTCGCTCGGCCTCGACATCGCACTCGGCGTGGGCGGTTTGCCGCGTGGCCGGG 896
Query 66531 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 66590
|||| || |||||||| || ||||| || || ||| | || || || || | | | |
Sbjct 897 TGGTCGAGATCTACGGTCCGGAATCGTCGGGCAAGACCACGCTCACGCTGCAGGTGATCG 956
Query 66591 CCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACC 66650
|| | ||||||| ||| |||| || || | ||||||||| || ||| | || |||
Sbjct 957 CCGAAATGCAGAAGCTCGGCGGCACGGCGGCGTTCATCGACGCGGAACACGCGCTCGACG 1016
Query 66651 CTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCCGATA 66710
| |||||| |||||| ||| || | | | || | | ||||| || |
Sbjct 1017 TGCAATACGCCGCCAAGCTCGGCGTGAACGTGCCCGAACTGCTCATCTCGCAGCCGGACA 1076
Query 66711 CCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCG 66770
| ||||||||||| || || ||| ||| || || || ||| | | |||
Sbjct 1077 CGGGCGAGCAGGCGCTCGAAATCACCGACGCGCTGGTGCGCTCGGGCTCGATCGACATGA 1136
Query 66771 TCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGG 66830
|||| | ||||| || ||||| || |||||| ||||| ||||||| || || || |
Sbjct 1137 TCGTGATCGACTCGGTCGCGGCGCTCGTGCCGAAGGCCGAAATCGAAGGTGAAATGGGCG 1196
Query 66831 ACAGTCACGTC--GGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGCAAGCTCACTGG 66888
|| || | | || ||||| |||||||| ||||| ||||| ||||||||||||| ||
Sbjct 1197 AC--TCGCTGCCGGGTCTGCAGGCGCGCCTGATGTCGCAGGCGCTGCGCAAGCTCACCGG 1254
Query 66889 CACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGG 66948
||| ||| | || ||| || | ||| |||||||| | ||| |||||||||
Sbjct 1255 CACGATCAAGAAGACGAACTGCATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGG 1314
Query 66949 CAACGTGGGCTACGGCCCGAAT---GAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTA 67005
| ||| | |||| ||| || |||||||||||||| || || | | ||||||
Sbjct 1315 C---GTGATGTTCGGC---AATCCGGAAACCACCACGGGCGGCAACGCGCTCAAGTTCTA 1368
Query 67006 CGCCTCAGTCCGTATGGATGTCCGTCGCATCG---CCACCGAGAAGGAAGGCGATGAGGC 67062
| | || || ||| |||| | || ||||||| | | | ||||| | | ||| | |
Sbjct 1369 CTCGTCGGTGCGTCTGGACATTCGCCGCATCGGTTCGATCAAGAAGAACGACGAAGTGA- 1427
Query 67063 TGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAA 67122
|||||| | || || ||||||||||| ||||||||| | | |||||| |||| |
Sbjct 1428 --TCGGCAGCGAAACGCGTGTGAAGGTCGTGAAGAACAAGGTTTCGCCGCCGTTCCGCGA 1485
Query 67123 TGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCT 67182
|||| |||| | | | ||||| ||||||||||||||| ||| |||| || |||||||
Sbjct 1486 AGCCGTGTTCGACATTCTCTACGGCGAGGGCATCTCGCGTCAGGGCGAAATCGTCGACCT 1545
Query 67183 GGCCGTG 67189
| ||||
Sbjct 1546 CGGCGTG 1552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242654535818058
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |