Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_028947.1 Length=62738 Score E Sequences producing significant alignments: (Bits) Value seq3196 145 3e-30 >seq3196 Length=8014 Score = 145 bits (160), Expect = 3e-30 Identities = 136/173 (79%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 36376 GTGAACCACCCGGCGCACTACACGTCGCATCCCAGCGGAGTCGAGTGCATCACCGTCACT 36435 || || |||||| ||| |||||| || || ||||| || ||||||||| ||||| Sbjct 5331 GTCAATCACCCGAAGCATTACACGCAACACCCGAGCGGCGTGGAGTGCATCCAGATCACT 5390 Query 36436 GAGCACATGGGCTTCAACCTCGGCAACGCCGTTAAGTACATCTGGCGCTGCGACCTGAAG 36495 ||||||||||||||||||||||| ||||| || ||||||||||||||| ||||||||| Sbjct 5391 GAGCACATGGGCTTCAACCTCGGAAACGCGGTCAAGTACATCTGGCGCGCCGACCTGAAA 5450 Query 36496 CGCGACGCGATCGAGGATCTGCGCAAGGCACGGTTCTACATCGACCGTGAAAT 36548 |||||| ||||| ||| || ||||| || | || ||||| || ||||| Sbjct 5451 AACGACGCCATCGAAGATTTGAAAAAGGCGCGTTGGTATATCGAACGCGAAAT 5503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200466397096693