Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_028961.1 Length=55094 Score E Sequences producing significant alignments: (Bits) Value seq2291 87.8 6e-13 >seq2291 Length=11769 Score = 87.8 bits (96), Expect = 6e-13 Identities = 122/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 40700 ATCGTGACGAGCCCGCCGTACTACGGGCTGCGGGATTACGGCGCTGAGGGGCAGTACGGG 40759 ||||||||| |||||||| ||||||||||| || |||||| | || || || Sbjct 1536 ATCGTGACGTCGCCGCCGTATTACGGGCTGCGTGACTACGGCCACGTAGGCCAACTTGGA 1477 Query 40760 CTGGAGGAATCGCCTGCCGCATATGTCGAGACGATGCGCGCGTTGTTCGCCGAACTGCGC 40819 |||||| ||||||| | ||| || ||| ||||| || | ||||| || |||| Sbjct 1476 CTGGAGAAATCGCCGGACGCTTACATCGCCGCGATGGTCGAGGTGTTCCGCGCCGCGCGC 1417 Query 40820 CGCGTGCTGGCCGACGACGGCACACTGTGGCTCAACCTCGGCGACAGCTAC 40870 || |||| ||||| ||||| || ||||| ||| | ||||| |||||| Sbjct 1416 GATGTCCTGGTTGACGATGGCACGCTCTGGCTGAACATTGGCGATAGCTAC 1366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 176033405876064