Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_028979.1 Length=57253 Score E Sequences producing significant alignments: (Bits) Value seq2291 86.0 2e-12 >seq2291 Length=11769 Score = 86.0 bits (94), Expect = 2e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 44219 GTGTGGACGATCCCGACGACACCGTTCCCCGGCTCGCACTTCGCCACGTTCCCGCAGGAG 44278 ||||||||||| ||||||| || | ||| | ||||||||||| ||||| || || Sbjct 780 GTGTGGACGATTGCGACGACGCCCTATAAGGGCGCCCACTTCGCCACATTCCCTCAAGAA 721 Query 44279 C-TGCCGCGCCGCTGCATCTTGGCCGGGTGCAAGCCCGGCGGCGTCGTGCTCGACCCGTT 44337 | || | ||| ||| | | || || | ||| |||| | ||||| |||| ||||| Sbjct 720 CTTGTTGAGCC-ATGCGTGCTCGCGGGCTCGCGGCCAGGCGACATCGTGTTCGATCCGTT 662 Query 44338 CCACGGTTCCGGCACAACGGGTCTGGTGGCGCTCGGTCTCGGCCGCCGCTACGTCGGCAT 44397 ||| ||||||||| || | ||| |||| | |||||||||| | | ||||| Sbjct 661 TTTCGGGAGCGGCACAACCGGCCAGGTCGCGCAGCGGCTCGGCCGCCATTTCATCGGCTG 602 Query 44398 CGAGCTGAACGCCGCCTAC 44416 ||| |||||| |||| ||| Sbjct 601 CGAACTGAACCCCGCATAC 583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182936488615210