Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_028980.1 Length=62181 Score E Sequences producing significant alignments: (Bits) Value seq4028 95.1 5e-15 >seq4028 Length=6092 Score = 95.1 bits (104), Expect = 5e-15 Identities = 125/168 (74%), Gaps = 4/168 (2%) Strand=Plus/Minus Query 33072 CGCCCGGGCGCTGTGGGACGCGATCATGCGCGGGACCTGGGACTGGGCGGAGCCTGGGGT 33131 |||||| ||||||||||| ||||||||||| ||||| ||| ||| ||||| || || Sbjct 3163 CGCCCGCGCGCTGTGGGATGCGATCATGCGTTCGACCTACGACGTGGCCGAGCCGGGCGT 3104 Query 33132 GCTGTTCATCGACGCG-ATCAACCGCATGAACAACCT-CTGGTACTGCGAGACCATCGCC 33189 | |||||||| |||| || ||| |||||||| | | || ||| ||||| | Sbjct 3103 GGTGTTCATC-TCGCGCATGAACGAGGACAACAACCTGCGCGCGCT-CGAATCCATCCGC 3046 Query 33190 GCCACCAACCCCTGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCTGC 33237 || |||||||| ||||| ||||| || || || |||||||| |||| Sbjct 3045 GCGACCAACCCGTGCGGCGAGCAGCCTCTGCCCGCCTACGGTTGCTGC 2998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198693038748842