Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_029047.1 Length=32894 Score E Sequences producing significant alignments: (Bits) Value seq6053 84.2 5e-12 >seq6053 Length=3316 Score = 84.2 bits (92), Expect = 5e-12 Identities = 100/133 (75%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 886 GACGCACAGCGCCGGGCTTACGTGATCGCCGACAACAAGCTCGCGTTGAACGCCGGATGG 945 || || ||| ||| || | ||| |||||||||||| ||||||||||| |||||| ||| Sbjct 604 GAGGCGCAGTTCCGCGCGTTCGTCATCGCCGACAACCAGCTCGCGTTGCTCGCCGGGTGG 545 Query 946 GACGACGAAGCATTGCAGGCCGAACTCGACCGA-CTGCGAGATGAGGACTTCGATTTGGA 1004 |||||||| ||| |||| | |||||| |||| ||||| | |||||| |||| Sbjct 544 GACGACGAGCTGCTGCGTCTCGAAGT-GACCGAGTTGCGCGATGACGGCTTCGACGTGGA 486 Query 1005 TTTGCTTGGGTTC 1017 |||| |||||| Sbjct 485 CCTGCTCGGGTTC 473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105052193829264