Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_029079.1 Length=75339 Score E Sequences producing significant alignments: (Bits) Value seq5777 277 9e-70 >seq5777 Length=3561 Score = 277 bits (306), Expect = 9e-70 Identities = 503/729 (69%), Gaps = 23/729 (3%) Strand=Plus/Plus Query 66094 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 66153 ||||||| || ||| || ||| ||| || ||| | || || | ||| | ||||||| Sbjct 837 CCACCGGTTCGCTCGGCCTCGACATCGCACTCGGCGTGGGCGGTTTGCCGCGTGGCCGGG 896 Query 66154 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 66213 |||| || |||||||| || ||||| || || ||| | || || || || | | | | Sbjct 897 TGGTCGAGATCTACGGTCCGGAATCGTCGGGCAAGACCACGCTCACGCTGCAGGTGATCG 956 Query 66214 CC--AATGCCCAGAAGGCCGGTGGCAACGCTGCCTACATCGACGCTGAGCACTCCCTGGA 66271 || ||||| ||||| ||| |||| || || | ||||||||| || ||| | || || Sbjct 957 CCGAAATGC--AGAAGCTCGGCGGCACGGCGGCGTTCATCGACGCGGAACACGCGCTCGA 1014 Query 66272 CCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGA 66331 | | |||||| |||||| ||| || | | | || | | |||||||| Sbjct 1015 CGTGCAATACGCCGCCAAGCTCGGCGTGAACGTGCCCGAACTGCTCATCTCGCAGCCGGA 1074 Query 66332 CACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCAT 66391 ||| ||||||||||| || || ||| ||| || || || ||| | | ||| Sbjct 1075 CACGGGCGAGCAGGCGCTCGAAATCACCGACGCGCTGGTGCGCTCGGGCTCGATCGACAT 1134 Query 66392 CGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGG 66451 |||| | ||||| || ||||| || |||||| ||||| ||||||| || || || Sbjct 1135 GATCGTGATCGACTCGGTCGCGGCGCTCGTGCCGAAGGCCGAAATCGAAGGTGAAATGGG 1194 Query 66452 GGACAGTCACGTC--GGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACC 66509 ||| || | | || ||||| |||||||| ||||||||||| |||||||||||||| Sbjct 1195 CGAC--TCGCTGCCGGGTCTGCAGGCGCGCCTGATGTCGCAGGCGCTGCGCAAGCTCACC 1252 Query 66510 GGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATC 66569 ||||| ||| | || ||| || | ||| |||||||| | ||| ||||||| Sbjct 1253 GGCACGATCAAGAAGACGAACTGCATGGTGATCTTCATCAACCAGATCCGCATGAAGATC 1312 Query 66570 GGCAACGTGGGCTACGGC---CCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTC 66626 ||| ||| | |||| ||| || ||||||||||||||||| || | | |||| Sbjct 1313 GGC---GTGATGTTCGGCAATCCG---GAAACCACCACGGGCGGCAACGCGCTCAAGTTC 1366 Query 66627 TACGCCTCAGTCCGCATGGATGTCCGTCGCATCG---CCACCGAGAAGGAAGGCGATGAG 66683 ||| | || || || |||| | || ||||||| | | | ||||| | | ||| | | Sbjct 1367 TACTCGTCGGTGCGTCTGGACATTCGCCGCATCGGTTCGATCAAGAAGAACGACGAAGTG 1426 Query 66684 GCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGC 66743 |||||| | || || ||||||||||| ||||||||| | | |||||| |||| Sbjct 1427 A---TCGGCAGCGAAACGCGTGTGAAGGTCGTGAAGAACAAGGTTTCGCCGCCGTTCCGC 1483 Query 66744 AATGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGAC 66803 | |||| |||| | | | ||||| ||||||||||||||| ||| |||| || ||||| Sbjct 1484 GAAGCCGTGTTCGACATTCTCTACGGCGAGGGCATCTCGCGTCAGGGCGAAATCGTCGAC 1543 Query 66804 CTGGCCGTG 66812 || | |||| Sbjct 1544 CTCGGCGTG 1552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 240755350187100