Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_029093.1 Length=75796 Score E Sequences producing significant alignments: (Bits) Value seq5777 279 2e-70 >seq5777 Length=3561 Score = 279 bits (308), Expect = 2e-70 Identities = 501/727 (69%), Gaps = 19/727 (3%) Strand=Plus/Plus Query 65758 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 65817 ||||||| || ||| || ||| ||| || ||| | || || | ||| | ||||||| Sbjct 837 CCACCGGTTCGCTCGGCCTCGACATCGCACTCGGCGTGGGCGGTTTGCCGCGTGGCCGGG 896 Query 65818 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 65877 |||| || |||||||| || ||||| || || ||| | || || || || | | | | Sbjct 897 TGGTCGAGATCTACGGTCCGGAATCGTCGGGCAAGACCACGCTCACGCTGCAGGTGATCG 956 Query 65878 CCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACC 65937 || | ||||||| ||| |||| || || | ||||||||| || ||| | || ||| Sbjct 957 CCGAAATGCAGAAGCTCGGCGGCACGGCGGCGTTCATCGACGCGGAACACGCGCTCGACG 1016 Query 65938 CTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACA 65997 | |||||| |||||| ||| || | | | || | | |||||||||| Sbjct 1017 TGCAATACGCCGCCAAGCTCGGCGTGAACGTGCCCGAACTGCTCATCTCGCAGCCGGACA 1076 Query 65998 CTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCG 66057 | ||||||||||| || || ||| ||| || || || ||| | | ||| Sbjct 1077 CGGGCGAGCAGGCGCTCGAAATCACCGACGCGCTGGTGCGCTCGGGCTCGATCGACATGA 1136 Query 66058 TCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGG 66117 |||| | ||||| || ||||| || |||||| ||||| ||||||| || || || | Sbjct 1137 TCGTGATCGACTCGGTCGCGGCGCTCGTGCCGAAGGCCGAAATCGAAGGTGAAATGGGCG 1196 Query 66118 ACAGTCACGTC--GGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGG 66175 || || | | || ||||| |||||||| ||||||||||| |||||||||||||||| Sbjct 1197 AC--TCGCTGCCGGGTCTGCAGGCGCGCCTGATGTCGCAGGCGCTGCGCAAGCTCACCGG 1254 Query 66176 CACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGG 66235 ||| ||| | || ||| || | ||| |||||||| | ||| ||||||||| Sbjct 1255 CACGATCAAGAAGACGAACTGCATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGG 1314 Query 66236 CAACGTGGGCTACGGC---CCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTA 66292 | ||| | |||| ||| || ||||||||||||||||| || | | |||||| Sbjct 1315 C---GTGATGTTCGGCAATCCG---GAAACCACCACGGGCGGCAACGCGCTCAAGTTCTA 1368 Query 66293 CGCCTCAGTCCGCATGGATGTCCGTCGCATCG---CCACCGAGAAGGAAGGCGATGAGGC 66349 | | || || || |||| | || ||||||| | | | ||||| | | ||| | | Sbjct 1369 CTCGTCGGTGCGTCTGGACATTCGCCGCATCGGTTCGATCAAGAAGAACGACGAAGTGA- 1427 Query 66350 TGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAA 66409 |||||| | || || ||||||||||| ||||||||| | | |||||| |||| | Sbjct 1428 --TCGGCAGCGAAACGCGTGTGAAGGTCGTGAAGAACAAGGTTTCGCCGCCGTTCCGCGA 1485 Query 66410 CGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCT 66469 |||| |||| | | | ||||| ||||||||||||||| ||| |||| || ||||||| Sbjct 1486 AGCCGTGTTCGACATTCTCTACGGCGAGGGCATCTCGCGTCAGGGCGAAATCGTCGACCT 1545 Query 66470 GGCCGTG 66476 | |||| Sbjct 1546 CGGCGTG 1552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242216508155699