Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_030792.1 Length=32690 Score E Sequences producing significant alignments: (Bits) Value seq61051 158 3e-34 >seq61051 Length=235 Score = 158 bits (174), Expect = 3e-34 Identities = 186/242 (77%), Gaps = 10/242 (4%) Strand=Plus/Plus Query 5837 TCCAGGTGGTCAGAAAAGACCGtttttttGTTGTCCAGCTTGGTGGCGAACGAGCCGTAG 5896 |||| |||||||||||||| | |||| |||| ||||||||||| ||||| |||||| Sbjct 1 TCCATCTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGACCCGTAG 58 Query 5897 AGGGCGTTGGAGAGCAGCTTTGCGATGCTGCGCATGGTTTGGTTCTTTTCTCGGTCGGCC 5956 ||||||||||| |||| ||| |||||| ||||| |||||||| ||| | || ||||| Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGT--TTTGCGCGATCGGCG 116 Query 5957 TTCTCTTTGGCCGCGATGTTGAGTTGCACGTACTCTTTGGCTATGCACTTCCATTCTGGA 6016 ||| |||||||||||||| || |||||||| || || | |||| |||||| ||| Sbjct 117 CGCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGA 175 Query 6017 AACACGGTGGTCTTTTCGTCCGGCAGGATGGTG-ACGCTCCAGCCGCGGTTGTGTAGCGT 6075 || ||||||| ||| | |||| | |||| |||| ||| ||| || |||| || || Sbjct 176 AA-GCGGTGGTGCGCTCG-CGGGCACCA-GGTGCACGCGCCAACCGAGG-TGTGCAGGGT 231 Query 6076 GA 6077 || Sbjct 232 GA 233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104399934042888