Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_031029.1 Length=93686 Score E Sequences producing significant alignments: (Bits) Value seq2099 107 1e-18 >seq2099 Length=12992 Score = 107 bits (118), Expect = 1e-18 Identities = 264/396 (67%), Gaps = 21/396 (5%) Strand=Plus/Plus Query 7177 GCCGGCTG-ACCGGGTCAACCGTCAGTTCACCGCGG--CGGCACCGAACGCGTTGTGGGT 7233 ||| |||| |||||||||| ||||||||| || | ||| || |||||| ||||||| Sbjct 6207 GCCCGCTGGACCGGGTCAAACGTCAGTTCCAGGCCGATCGG--CCCAACGCGCTGTGGGT 6264 Query 7234 GGCGGACCTGACCTACATCCGCACCCACTCGGGCTGGGTGTACGCGGCGTTCGTCCTGGA 7293 ||||| | ||||| | | || || |||| ||||||| ||| ||||| || Sbjct 6265 CGCGGATTTTACCTATTGCTGGACATGGTCCGGCTTTGTGTACGTGGCCTTCGTGACCGA 6324 Query 7294 CGTGTTCTCGCGGATGGTCGTCGGCTGGCAGGTCTCGACCACCATGCACACCGACCTCGC 7353 ||||| ||||| ||||||| |||| || || || | |||| || ||| ||| Sbjct 6325 TGTGTTTGCGCGGCGTATCGTCGGTTGGCGCGTGTCAGCCTCGATGCGAACTGACTTCGT 6384 Query 7354 CCTCGACGCCCTGAACATGGGATTGTGGGCACGGTCGCGTGCCGGCCACGACGTGGCCGG 7413 || ||||| |||||| || || || | |||| |||| | | |||| Sbjct 6385 GCTGGACGCGCTGAACCAGGCGTT----ACATGATCGCCAGCCGCC--------GCCCGG 6432 Query 7414 GCTGATCCACCACTCCGACCGCGGAGTGCAATACCGAGCCATCCGCTACACCGAACGACT 7473 ||| || ||||| ||||| | ||| |||||| | ||| || ||||||||||| | Sbjct 6433 GCTCATTCACCATTCCGATCACGGGTCGCAATATCTCAGCATTCGGTACACCGAACGTTT 6492 Query 7474 GGCCGAAGCCGAAGCGGTGA--CATCTGTTGGCTCCAAAGGGGATTCATACGACAACGCG 7531 || || | | ||| ||| |||| || || || || || || |||||||||| Sbjct 6493 GGTGGACGTGG--GCGTTGAGCCATCAGTCGGAACCGTCGGCGACTCCTACGACAACGTA 6550 Query 7532 ATGGCTGAGGCGTTCAACTCGCTGTTCAAAGCCGAA 7567 |||| || || ||||| ||| || |||||| Sbjct 6551 CTGGCCGAAACGATCAACGGCTTGTATAAGGCCGAA 6586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299415886838929