Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_031077.1 Length=41760 Score E Sequences producing significant alignments: (Bits) Value seq3867 86.0 2e-12 >seq3867 Length=6412 Score = 86.0 bits (94), Expect = 2e-12 Identities = 138/191 (72%), Gaps = 7/191 (4%) Strand=Plus/Plus Query 29618 TTCGCTGTACACGACCTGCGCCGCACTGCCAGCACGCTGTTGCATGAAGCTGGCTATCCA 29677 ||| | || || ||||||||||| || | | ||||||||| | ||| |||| || | Sbjct 82 TTCACCGTTCATGACCTGCGCCGTACCGGCTCGACGCTGTTGAACGAAATCGGCT-TCAA 140 Query 29678 TC-AGACTGGATTGAAAAGGCGCTGGCGCATGAACA--GAAGGGCGT-GCGTGCGGTGTA 29733 | |||||||| || ||| |||||||| ||| | || | | | ||| |||| || Sbjct 141 CCGCGACTGGATCGAGAAGTGCCTGGCGCACGAAGAGGGACGCTCCTCGCGCTCGGTCTA 200 Query 29734 CAACAAAGCGGAGTACGCCAGGCAGCG-CGCCTACATGTTGCAGCAGTGGGCGAATATGG 29792 |||||| || ||||||||| ||| || || | ||||| |||| ||||||| ||| ||| Sbjct 201 CAACAAGGCCGAGTACGCCGAGCAACGACGTC-ACATGCTGCAAGAGTGGGCCAATCTGG 259 Query 29793 TTGATTGCTGG 29803 | ||| |||| Sbjct 260 TCGATGCCTGG 270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133399915721468