Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_031936.1 Length=49979 Score E Sequences producing significant alignments: (Bits) Value seq3196 156 1e-33 >seq3196 Length=8014 Score = 156 bits (172), Expect = 1e-33 Identities = 122/146 (84%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 45106 CACGCCAGCGGCGTCGAGTGCATCCAAATCACCGAGCACATGGGGTTCTGCCTCGGAAAC 45165 ||| | |||||||| ||||||||||| ||||| ||||||||||| ||| |||||||||| Sbjct 5358 CACCCGAGCGGCGTGGAGTGCATCCAGATCACTGAGCACATGGGCTTCAACCTCGGAAAC 5417 Query 45166 GCCGTCAAGTACATCTGGCGGGCCGACCTGAAACACGATGCGATCGAGGACCTGGAGAAG 45225 || ||||||||||||||||| |||||||||||| |||| || ||||| || || | ||| Sbjct 5418 GCGGTCAAGTACATCTGGCGCGCCGACCTGAAAAACGACGCCATCGAAGATTTGAAAAAG 5477 Query 45226 GCGCGCTGGTATCTGGATCGTGAGAT 45251 ||||| |||||| | || || || || Sbjct 5478 GCGCGTTGGTATATCGAACGCGAAAT 5503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159678950938254