Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_031948.1 Length=31481 Score E Sequences producing significant alignments: (Bits) Value seq61051 122 2e-23 >seq61051 Length=235 Score = 122 bits (134), Expect = 2e-23 Identities = 166/224 (74%), Gaps = 7/224 (3%) Strand=Plus/Plus Query 5630 TCAATTTGGTCAGAAAATACAGtttttttGTTGTCTAACTTCGTGGCAAACGACCCATAG 5689 || || ||||||||||| ||| | |||| |||| | ||| |||||||||||||| ||| Sbjct 1 TCCATCTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGACCCGTAG 58 Query 5690 AGGGCGTTGGAGAGTAGCTTGGCAATGCTGCGCATGGTTTGGTTCTTGCTTTTATCTGCC 5749 ||||||||||| || | |||||| ||| ||||| ||||||||| |||| ||| || Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTT-TTGC-GCGATCGGCG 116 Query 5750 AGCTCTTTGGCCTGAATGTTAAGTTGCACATATTCTCTAGCAAGACATTTCCACTCTGGG 5809 |||| |||||| ||||| || ||||| ||||| | |||| || ||| || ||| Sbjct 117 CGCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCATTC-GGG 174 Query 5810 AATATGGTGGCTCTCTCATCGGGGACAAGGCGGACGGTCCAACC 5853 || ||||| | ||| |||| || ||| | ||| |||||| Sbjct 175 AAAGCGGTGGTGCGCTC-GCGGGCACCAGGTGCACGCGCCAACC 217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100534335603042