Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_032105.1 Length=33562 Score E Sequences producing significant alignments: (Bits) Value seq61051 201 2e-47 >seq61051 Length=235 Score = 201 bits (222), Expect = 2e-47 Identities = 194/240 (81%), Gaps = 8/240 (3%) Strand=Plus/Plus Query 5995 CCATCTGGTCAGAAAACACAATCTGCTTGTTGTCCAACTTGGTAGCGAACGACCCGTAGA 6054 |||||||||||||||| ||||||| |||| ||| | |||||| || ||||||||||||| Sbjct 2 CCATCTGGTCAGAAAAGACAATCTT-TTGT-GTCAAGCTTGGTGGCAAACGACCCGTAGA 59 Query 6055 GGGCGTTGGAGAGCAGCTTGGCGATGGAGCGCTGCGTCTGGTTCTTTTCGCGGTCGGCCT 6114 |||||||||| |||| |||||||||||||||| | || |||| ||| |||| ||||| Sbjct 60 GGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGT--TTTGCGCGATCGGCGC 117 Query 6115 TTTCCTTGGCCGCGATGTTGAGCTGGACGTACTCTCTGGCCACGCACTTCCATCCCGGGA 6174 ||||||||||||||||| ||||| ||||| || | || |||||| |||| ||||| Sbjct 118 GCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCAT-TCGGGA 175 Query 6175 AGACGGTGGTCCTCTCGTCCGGCACCAGTCGCACTCCCCAGCCGCGGTTGTGGAGGGTGA 6234 | ||||||| | |||| | |||||||| |||| | ||| ||| || |||| ||||||| Sbjct 176 AAGCGGTGGTGCGCTCG-CGGGCACCAGGTGCACGCGCCAACCGAGG-TGTGCAGGGTGA 233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107188024894456