Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq10600 199 4e-46 seq35144 188 7e-43 seq15279 183 3e-41 seq59010 154 2e-32 seq11839 114 1e-20 seq57005 109 6e-19 seq42113 86.0 7e-12 >seq10600 Length=1274 Score = 199 bits (220), Expect = 4e-46 Identities = 207/271 (76%), Gaps = 19/271 (7%) Strand=Plus/Minus Query 8351 CTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCCCG 8410 ||||||| |||| ||| || || |||| |||| |||||||||||| || ||||| || Sbjct 1134 CTGTTGCACAGGGTGGGGTACAATGGCGCCATCTTTGCTCACTGCAACTTCTGCCTCACG 1075 Query 8411 GGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACA---------GGC 8461 ||| ||||| ||| |||| ||||||||||| |||||||||| |||| | | Sbjct 1074 GGTCCAAGCGATTGTCCTCCCTCAGCCTCCCAGGTAGCTGGGACTACACCACACTGGGAC 1015 Query 8462 AAAA------GCCACCACGCCAAGCTAATTTTTGT--ATTTTTAGTAGAGAGAGGGTTTC 8513 | | ||||||| ||| ||||||||||| | ||||||||||| || || ||||| Sbjct 1014 TACACCAGCTGCCACCATGCCTAGCTAATTTTTTTGGATTTTTAGTAGTGACAGCGTTTC 955 Query 8514 ACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCT 8573 || | ||||||||| |||||| || ||| | |||| |||||||| | ||||| ||||| Sbjct 954 ACTGTATTGGCCAGGATGGTCTTGATCTCTTCACCT--TGTGATCCCCTTGCCTTGGCCT 897 Query 8574 CCCAAAGTGCTGGGATTACAGGCATGAGCCA 8604 || || |||||||||||||||| ||||||| Sbjct 896 CCAAATTTGCTGGGATTACAGGCCTGAGCCA 866 >seq35144 Length=406 Score = 188 bits (208), Expect = 7e-43 Identities = 126/138 (91%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 8479 GCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGA 8538 |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| Sbjct 393 GCTAATTTTTGTATTTTTAGTAGAGAT-GGGTTTCACCATGTTG-CCAGGCTAGTCTCGA 336 Query 8539 ACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCAT 8598 ||||||| |||| | |||||||||||| |||||||||||||||||||||||||||||| Sbjct 335 ACTCCTGGGCTCAAGCAATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCAT 276 Query 8599 GAGCCACCGCGCCTGGCC 8616 |||| ||| ||||||||| Sbjct 275 GAGCTACCACGCCTGGCC 258 Score = 118 bits (130), Expect = 1e-21 Identities = 89/105 (85%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 8512 TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGC 8571 |||| |||||| |||||||||||||||||||||| || ||||||| || ||| ||| Sbjct 126 TCACTATGTTGCCCAGGCTGGTCTCGAACTCCTGGGTTCTAGTGATCCTCCCACCTTGGC 185 Query 8572 CTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 |||||| ||| ||||||||||||||||||||||||| || |||| Sbjct 186 CTCCCATCGTGTTGGGATTACAGGCATGAGCCACCGCACCCGGCC 230 >seq15279 Length=855 Score = 183 bits (202), Expect = 3e-41 Identities = 175/223 (78%), Gaps = 7/223 (3%) Strand=Plus/Plus Query 8401 CCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGG 8460 ||||||||||||||| ||| ||||||||||||||||||| || |||| ||||| ||||| Sbjct 1 CCGCCTCCCGGGTTCGAGCGCTTCTCCTGCCTCAGCCTCCCGATTAGCGGGGATGACAGG 60 Query 8461 CAAAAGCCACCACGCCAAGCTA-----ATTTTTGTATTTTTAGTAGAGAGA--GGGTTTC 8513 | || ||||||| ||| || ||||| |||||||||| | | || || Sbjct 61 GAGGCACCCCCACGCCTGGCTTGGCTGATGTTTGTGTTTTTAGTAGGCACGCCGTGTCTC 120 Query 8514 ACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCT 8573 |||||||| |||||||||||| |||||| |||||| |||||| | || ||||||||| Sbjct 121 TCCATGTTGCTCAGGCTGGTCTCCAACTCCCGACCTCCTGTGATGCGCCCACCTCGGCCT 180 Query 8574 CCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 | | |||||||||||| || ||| |||||||||| ||| |||| Sbjct 181 CTCGAAGTGCTGGGATGACGGGCGTGAGCCACCGTGCCCGGCC 223 >seq59010 Length=244 Score = 154 bits (170), Expect = 2e-32 Identities = 102/113 (90%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 8349 CTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCC 8408 ||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||| Sbjct 139 CTCTGTTGCCCAGGCTGGAGTGCAGTGGCATGATCTTGGCTCACTGCAACCTCTGCCTCC 80 Query 8409 CGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGC 8461 | ||||||| | |||||||||||||||||||| ||||| |||||| || |||| Sbjct 79 CAGGTTCAAACGATTCTCCTGCCTCAGCCTCCTGAGTAACTGGGACTATAGGC 27 >seq11839 Length=1111 Score = 114 bits (126), Expect = 1e-20 Identities = 182/260 (70%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 8349 CTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCC 8408 || ||||||||||||||| ||||||||| ||| | |||||||| | || ||||| Sbjct 1098 CTTTGTTGCCCAGGCTGGGGTGCAGTGGTGCAATCACTGCTCACTGTAGATTCAACCTCC 1039 Query 8409 CGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCC 8468 | | |||||| || || | ||| |||||| | | ||| ||| ||||| | | Sbjct 1038 CAAGCTCAAGCAATCCTTCCACCTTGGCCTCCCAAATTGCTAGGACAACAGGTGCACATC 979 Query 8469 ACCACGCCAAGCTAATTTTTGTA--TTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCA 8526 || | ||| | || ||||| || ||||| |||||| |||| | |||||||| ||| Sbjct 978 ACTATGCCCACCTTTTTTTTTTAACTTTTTGATAGAGACTGGGTCTTGCCATGTTGCCCA 919 Query 8527 GGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGG 8586 || | | ||||||||| |||| | |||| | || ||||| || |||||| Sbjct 918 GGTTTCTTGTGAACTCCTGGGCTCAAGGAATCCTCTCATTTCAGCCTCTTCAACTGCTGG 859 Query 8587 GATTACAGGCATGAGCCACC 8606 |||||| |||||||||||| Sbjct 858 TATTACAAGCATGAGCCACC 839 >seq57005 Length=253 Score = 109 bits (120), Expect = 6e-19 Identities = 148/200 (74%), Gaps = 16/200 (8%) Strand=Plus/Plus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 |||| ||||| ||||||||||||||||||||| ||||||| ||||||||||| ||| | Sbjct 62 TCTCGTTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCTG 121 Query 8404 CCTCCCGGGTTCAAGCT---ATTCTCCT---GCCTCAGC--CTCCAGAGTAGCTGGGATT 8455 ||||||||||||| | | | ||| | | |||| ||| ||| |||| | Sbjct 122 CCTCCCGGGTTCACGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAG--GCTGAG--- 176 Query 8456 ACAGGCAAAAGCCACCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCAC 8515 |||| || | | | ||| || |||||||||||||||||||| ||||||||| Sbjct 177 GCAGGAGAATGGCTTTA-GCCGGGC--GGTTTTGTATTTTTAGTAGAGACGGGGTTTCAC 233 Query 8516 CATGTTGGCCAGGCTGGTCT 8535 | |||| |||||| |||||| Sbjct 234 CGTGTTAGCCAGGATGGTCT 253 >seq42113 Length=344 Score = 86.0 bits (94), Expect = 7e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 64426 TGATGTTATTGGAATTGATGAAGGGCAATTTTTTACTGATATAGTTGAATTTTCTGAAAA 64485 |||||| |||||||||||||| || |||||||| | ||| |||| ||| || || Sbjct 132 TGATGTCATTGGAATTGATGAGGGTCAATTTTTCCCGGATTTAGTGAGCTTTAGCGAGAA 191 Query 64486 TATGGCCAATAAAGGAAAAATTGTAATTGTTTCAGCGTTAGATGCGACATATAAAAGAGA 64545 ||||||||| |||||| | |||||||| |||| |||||| |||| | || | Sbjct 192 AATGGCCAATGGAGGAAAGACAGTAATTGTGGCAGCACTAGATGGTACATTCCAGCGAAA 251 Query 64546 ACCATTTGGTAATATCCTAAATCTAGTTCCATTAGCTGAAAAAGTAATAAAATTAAATGC 64605 |||||||| | | || | | ||||| | ||||| || | |||| | | ||| Sbjct 252 GCCATTTGGAAGCGTTTTAGAAATCATTCCAGTTGCTGAGCTTGTGACAAAACTTACTGC 311 Query 64606 TATATGTAAAATATGTTTCAAAGATGC 64632 | | |||| | || || |||||||| Sbjct 312 TGTTTGTATGGTGTGCTTTAAAGATGC 338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521033738321800