Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012-
07-09] 1,228 sequences; 25,723,383 total letters
Query= NC_015780.1
Length=205791
Score E
Sequences producing significant alignments: (Bits) Value
seq16 109 7e-19
seq329 96.9 5e-15
>seq16
Length=97561
Score = 109 bits (120), Expect = 7e-19
Identities = 243/365 (67%), Gaps = 0/365 (0%)
Strand=Plus/Plus
Query 19228 CCTTTTATTGATACATCAATAAATGCAATTTGGAATGATTGGCAACATTATCCCAACGGC 19287
|||||||||||| ||| | ||||| |||| |||||||||||||||||| | ||
Sbjct 8216 CCTTTTATTGATGTATCTGTGAATGCCGAATGGAGTGATTGGCAACATTATCCAGATGGT 8275
Query 19288 AGACCAAATTATTTATATTCCAAACAAGCTGTTGAATGGAATGCTGATGGTTTAGTATTT 19347
||||||||| | ||||| |||||| |||| | ||| |||||||||||| |||
Sbjct 8276 AGACCAAATCCAATTTATTCTCAACAAGTCATTGATTATAATCTTGATGGTTTAGTCTTT 8335
Query 19348 GGATTTATTACATTATCTGCTAAAGGTAAGGCTTGTTGGGCTGCTCAAGATACTATGCCA 19407
|| || ||||| ||||| | | | ||||| |||||||||||| | |||||
Sbjct 8336 GGTTTCATTACTCTATCTACATCAAACACTGCTTGCTGGGCTGCTCAACCCAAAATGCCT 8395
Query 19408 TTAGACTGGTCTTTACCTTTGGCCAAAGAACTTACTTTATCCGGTAAAGAGACAATTATT 19467
| | ||| || | || ||||| | || | ||| |||| | ||| |
Sbjct 8396 CTCAATTGGGCTCTTCCATTGGCTCAGGATATCCAAAAGTCCAATAAAAAAGTAATCGTA 8455
Query 19468 TCATTTGGTGGAGCAAGTAACCCAGATATTTCATATAAATTTTCCATTGATGAATTGGTT 19527
||||||||||| ||| || ||||||| | |||| | ||||| |||||||
Sbjct 8456 TCATTTGGTGGTGCATCAAATAGAGATATTAGCACTCAATTCACTGTTGATCAATTGGTA 8515
Query 19528 CAAACTTACCTTGATGTGATAGAATTATATAATCCATCTGGATTAGATTTTGATTTAGAA 19587
| || || | | || | | || || | | ||| || ||||||||||| |||
Sbjct 8516 GATACCTATAATCAAACCATCACAATGTACAACGCCTATGGCTTGGATTTTGATTTGGAA 8575
Query 19588 AATGG 19592
|||||
Sbjct 8576 AATGG 8580
>seq329
Length=25976
Score = 96.9 bits (106), Expect = 5e-15
Identities = 247/374 (66%), Gaps = 18/374 (5%)
Strand=Plus/Plus
Query 19228 CCTTTTATTGATACATCAATAAATGCAATTTGGAATGATTGGCAACATTATCCCAACGGC 19287
|||||||||||| | | |||||| |||| |||||||||| ||||||| | ||
Sbjct 22650 CCTTTTATTGATGTTACTGTGAATGCAGAATGGAGTGATTGGCAAAATTATCCAGAAGGT 22709
Query 19288 AGACCAAATTATTTATATTCCAAACAAGCTGTTGAATGGAATGCTGATGGTTTAGTATTT 19347
||||||||| | ||||| |||||| |||| | ||| |||||||| | ||
Sbjct 22710 AGACCAAATCCAATTTATTCTCAACAAGTCATTGATTATAATCTAGATGGTTTGATTCTT 22769
Query 19348 GGATTTATTACATTATCTGCTAAAGGTAAGGCTTGTTGGGCTGCTCAAGATACTATGCCA 19407
|| || || || ||||| | | | |||||||||||| ||||| || ||||
Sbjct 22770 GGTTTCATCACTCTATCTACATCAAACACTGCTTGTTGGGCTTCTCAACCCACAATGCAT 22829
Query 19408 TTAGACTGGTCTTTACCTTTGGCCAAAGAACTTACTTTATCC----GGTAAAGAGACAAT 19463
| || ||| | |||| ||||| |||| ||||| | |||| | | ||
Sbjct 22830 CTCGATTGGGCACTACCATTGGCTGAAGA--------TATCCAAAAGTTAAATAAAAAAG 22881
Query 19464 TA----TTTCATTTGGTGGAGCAAGTAACCCAGATATT-TCATATAAATTTTCCATTGAT 19518
|| | ||||||||||| ||| || || ||| || | ||||| || |||||
Sbjct 22882 TAATCGTATCATTTGGTGGTGCATCAAATAGTGACATTAGCACA-AAATTCTCTGTTGAT 22940
Query 19519 GAATTGGTTCAAACTTACCTTGATGTGATAGAATTATATAATCCATCTGGATTAGATTTT 19578
|| ||||| || || || | | || | | || ||| ||| |||||| ||||||
Sbjct 22941 GATTTGGTACACACCTATAATCAAACTATCACAATGTACAATGCATATGGATTGGATTTT 23000
Query 19579 GATTTAGAAAATGG 19592
||||| || |||||
Sbjct 23001 GATTTGGAGAATGG 23014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658393093510880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |