Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq382 646 7e-180 seq134 542 2e-148 seq830 210 2e-48 seq463 125 5e-23 seq558 122 7e-22 seq699 104 2e-16 seq660 100 2e-15 seq86 96.9 3e-14 seq529 89.7 4e-12 seq145 86.0 5e-11 seq98 86.0 5e-11 >seq382 Length=23072 Score = 646 bits (716), Expect = 7e-180 Identities = 1111/1600 (69%), Gaps = 31/1600 (2%) Strand=Plus/Plus Query 281260 ATAATTTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTTCTTGTTATCTGCTTCTTC 281319 ||| |||||||||| || || | ||||| ||||| | || | | || | |||| Sbjct 10528 ATAGTTTTCTAATTTGTTCTTTAATTCAAC-----CTTTTCTTTT-TGAGCTTCATCTTG 10581 Query 281320 A------AATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCC 281373 | |||| || ||| || || ||| | |||||||| |||| || ||||| || Sbjct 10582 AGACTTGAATTTTTCAGCATCGGCAACCATCTTTTCAATTTGTTCTTTGGATAATCTACC 10641 Query 281374 GCGATTATTAGTAATAGTAATATTCTTGGATTTGTTT---GTTGATTTATCAGCGGCAGT 281430 | || ||||| || || || ||| |||||| || | ||||| | |||| Sbjct 10642 CTTGTCGTTGGTAATGGTGATCTT-TTG--TTTGTTACCAGTGGTCTTATCTTCAGCAGA 10698 Query 281431 CACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCT 281490 ||||| ||||||||||||||||| | |||||| |||||||||||||| || || ||||| Sbjct 10699 TACATTGAGAATACCATTGGCATCAACATCAAAAGTGACTTCAATTTGTGGAACACCTCT 10758 Query 281491 CTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAA 281550 |||| |||||||| || | | |||| | || || ||| ||||| || | Sbjct 10759 TGGAGCTGGTGGGATACCACTGAGTTCAAATTTACCGAGTAAATTGTTATCACGGGTCAT 10818 Query 281551 TTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGT 281610 |||||||| ||| | | ||| || || | | ||| ||||| || || || | Sbjct 10819 GGAACGTTCACCTTCGTATACTTGAATCAATACACCTGGTTGGTTATCAGAGTAGGTAGA 10878 Query 281611 AAATACTCTGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAA 281669 || | | || | ||||| || ||||| || |||||||| ||| | | ||||||| Sbjct 10879 GAA-AGTTTGACTCTTTTTGCATGGAATAGTAGTGTTTCTTGGAATCAAAGAAGTCATAA 10937 Query 281670 TACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTT 281729 |||||| || ||||| | ||| | ||| | |||| ||||| | || | | || Sbjct 10938 CACCACCGGCAGTTTCAAGACCCATAGATAATGGAGCAACATCTAAAAGTAAGAGATCGG 10997 Query 281730 GAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 281789 || |||||| || || | ||||| || ||||| | ||||||||||| |||| Sbjct 10998 CAACCTTTTCACCACCTTCATTGTTGAGAATGGCAGCTTGGACGGCAGCACCATAGGCAA 11057 Query 281790 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAA 281849 | |||||||||||||| | | || || | || |||||||||||||| | | || | Sbjct 11058 CGGCTTCATCAGGATTGATGGATTTGTTCAATTCCTTACCATTGAAAAAGTCTTGGAGGA 11117 Query 281850 GTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTG 281909 ||||| || || |||||||||| || || || || | ||||||||||| | Sbjct 11118 GTTGTTGAACTTTTGGAATACGAGTGGAACCACCGACAAGTACAATTTCATTGATGGTCT 11177 Query 281910 ATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACA 281969 |||||||| ||| || || | ||||||||||| || |||| || | | | || | Sbjct 11178 TTTTATCCAATTTAGAGTCTCTGAGTACTTTTTCAACTGGATCAATACAACCACGGAAGA 11237 Query 281970 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTT 282029 || | ||||||||||||||| ||||||||| | || | || ||||||| |||| Sbjct 11238 GATCGGCACAAAGTTCTTCGAAACGAGCTCTAGTGATAGAGGTATAGAAATCAATACCTT 11297 Query 282030 CGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCAC 282089 | || | ||||||| |||||| | | ||| | ||||| || | | || |||| Sbjct 11298 CAAAGAGGGAATCAATTTCAATAGAGGCTTGGGAGCTTGAAGAGAGGGTTCTCTTGGCAC 11357 Query 282090 GTTCACATGCTGTCCTTAGTCTTCGTAAGGCT-TTTGCTGATTGATTCAAATCTGTTTTA 282148 ||||||| || || |||| | || | ||| |||| | | || | |||| ||||| Sbjct 11358 GTTCACAAGCGGTTCTTAAACGACGGACAGCTCTTTGGTTACCCATG-ATATCTTTTTTA 11416 Query 282149 TATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCT 282208 | |||||||||||| ||||| ||| | | || | ||| ||||||||||||||||| Sbjct 11417 TTTTTTCTCTTGAATTCTTCGACAAAGTGGTTGACCATACGGTTATCAAAATCTTCACCA 11476 Query 282209 CCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAA 282268 ||||| | ||||| || | |||||| | |||| || | |||||||||| | | Sbjct 11477 CCCAAATGAGTATCACCAGCGGTAGCTTTGACTTCAAAGACACCATCTTCAATGGTAAGG 11536 Query 282269 AGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCT 282328 || | |||||| || |||||||| | ||| ||||| | | |||| |||| | Sbjct 11537 AGGGAGACATCAAATGTACCACCACCGAGATCGAAAATTAAAATATTCTTTTCACCAGCA 11596 Query 282329 TGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAA 282388 || || ||||||||||| |||| ||| || ||||||||||||||||| || | Sbjct 11597 CCTTTCTTTTCAAGACCATAGGCAATAGCGGCGGCAGTTGGTTCATTAATGATACGTTGG 11656 Query 282389 ACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAA 282448 ||||| | ||||| | || |||||||| |||||||| | ||||||||| || ||| Sbjct 11657 ACATTTAATTTGGCAATAGTACCGGCATCTTTGGTGGCTTGACGTTGTGAATCATTGAAA 11716 Query 282449 TATGCAGGAACAGTAATAACGGC---ATCTGTTACTTCTTTTCCAATATAAGCGCTTGCT 282505 || || ||||||||||| || || ||| | || || || || | |||| || Sbjct 11717 TAGGCTGGAACAGTAATGACAGCTTTATC-GATAGTT--TTACCGAGGAAAGCTTCGGCG 11773 Query 282506 GTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGAT 282565 |||| ||||| ||| | | | ||| || ||||||| |||||| ||| | |||| | Sbjct 11774 GTTTCCTTCATCTTAATGAGGACCATAGAGGAAATTTCTTCTGGTGAAAAAGTTTTGGTT 11833 Query 282566 TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA---ATAACTTTAAAT 282622 |||| || | || |||| || |||||||| | ||| | ||| | |||||| ||| Sbjct 11834 TCATGTTTAAATTCAACTTGAATGTATGGTTTGTCACCTTCTTTAGCAACAACTTTGAAT 11893 Query 282623 GGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGT 282682 ||||||| ||||||||| | ||||||| || ||| | | |||||| || ||| Sbjct 11894 GGCCAATGTTTCATATCGGCTTGAACAACAGAATCTCCAAATTTACGACCAATCAAACGT 11953 Query 282683 TTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCA 282742 || |||||||| | |||||||||||||| | || |||||| ||||| ||||| ||| Sbjct 11954 TTGGCATCAAATACTGTATTGGTTGGATTCATAGCGACTTGATTCTTGGCAGCATCACCA 12013 Query 282743 ATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCA 282802 || | ||| || || ||||| | |||||| ||||| || || | |||||||||||| Sbjct 12014 ATTAATCTTTCAGTATCGGTAAAAGCAACATAGGATGGGGTAGTTCTATTACCTTGATCG 12073 Query 282803 TTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTA 282842 || ||||||||||||||| || |||||||||||||||||| Sbjct 12074 TTGGCAATAATTTCAACTCTATCATTTTGCCATACACCTA 12113 >seq134 Length=47702 Score = 542 bits (600), Expect = 2e-148 Identities = 1083/1580 (69%), Gaps = 41/1580 (3%) Strand=Plus/Plus Query 281321 AATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTA 281380 |||| || ||||| | | ||| | || ||||| || |||||| | || || Sbjct 35122 AATTGTTCGGCTTCCTTGACCATACGTTCGATTTGTTCAGCAGAGAGACGACCTTTATCG 35181 Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTTT---GTTGATTTATCAGCGGCAGTCACATTA 281437 || || || ||||| |||| |||||| || |||||||| | |||| ||||| Sbjct 35182 TTGGTGATGGTAAT---CTTGTGTTTGTTACCAGTGGATTTATCTTCAGCAGAGACATTG 35238 Query 281438 AGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA 281497 |||||||| |||||||| | |||||| |||||||||||||| ||||| ||||| | || Sbjct 35239 AGAATACCGTTGGCATCAATATCAAAGGTGACTTCAATTTGTGGGACACCTCTTGGGGCT 35298 Query 281498 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 281557 |||||||| || | | ||| | || || ||| ||||| || | ||| Sbjct 35299 GGTGGGATACCGCTGAGTTCGAATTTACCGAGTAAATTGTTATCACGGGTCATGGAACGT 35358 Query 281558 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 281617 ||||| ||| | | ||||| || ||||||| ||||| || || || | || | | Sbjct 35359 TCACCTTCGTAGACTTGGACTAAGACACCAGTTTGGTTATCAGAGTAGGTAGAGAA-AGT 35417 Query 281618 CTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 281676 || |||| || || || || || |||||||| || | | ||||| | |||||| Sbjct 35418 TTGAGTTTTCTTGCATGGGATGGTAGTGTTTCTTGGGATGAGGGTAGTCATGACACCACC 35477 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 281736 ||| ||||| | ||| | ||| | |||| ||||| | |||| ||||| || ||| Sbjct 35478 AGCAGTTTCGAGACCCATAGATAATGGAGCAACATCGAGAAGGAGAATATCGGCAACTTT 35537 Query 281737 TTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796 |||| || || ||||| || ||||| | ||||||||||| ||||||||||| Sbjct 35538 TTCACCACCTTCGTTGTTGAGAATGGCAGCTTGGACGGCAGCACCATAGGCAACAGCTTC 35597 Query 281797 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT 281856 ||| ||||| | | || |||| || |||||| |||||| | | || |||||| Sbjct 35598 ATCTGGATTGATGGATTTGTTTAATTCTTTACCGTTGAAATGGTCTTGGAGGAGTTGTTG 35657 Query 281857 TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTAT- 281915 || || |||||||||| || || || || | || ||||| || | || ||||| | Sbjct 35658 AACTTTTGGAATACGAGTGGAACCACCGACAAGGACGATTTCGTGAA--TG-GATTTCTT 35714 Query 281916 --CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTC 281973 | | ||| || || | ||||| || || || || | || | | | || | || Sbjct 35715 GTCTAATTTGGAGTCTTTGAGGACTTTGTCGACTGGGTCTAAACAACCACGGAAGAGATC 35774 Query 281974 TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCG 282031 | ||| ||||||||||| |||||| || || ||| | || || || || ||||| Sbjct 35775 AGCACAGAGTTCTTCGAAACGAGCTCTGGT--GATTGAGGTGTAGAAATCGATACCTTCA 35832 Query 282032 AACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGT 282091 || | || |||| |||||| | || ||||| || || || || | | || |||||| Sbjct 35833 AAGAGGGAGTCAATTTCAATGGAAGCTTGAGCAGATGAGGAGAGGGTTCTCTTGGCACGT 35892 Query 282092 TCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT--TCAAATCTGTTTTAT 282149 || || || || |||| | || | |||| || || ||| | | | |||| | || | Sbjct 35893 TCGCAAGCAGTTCTTAAACGACGGAGGGCTCTT--TGGTTGGTCATGAGATCTTTCTTGT 35950 Query 282150 ATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTC 282209 |||||||||||| ||||||||| | | || | ||||||||| ||||||||||| | Sbjct 35951 GTTTTCTCTTGAATTCTTCAACAAAGTGGTTGACTAAACGATTATCGAAATCTTCACCAC 36010 Query 282210 CCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAA 282269 | | | |||| || | |||||| | |||| || | |||||||||| | | | Sbjct 36011 CAAGATGGGTATCACCAGCGGTAGCTTTGACTTCAAAGACACCATCTTCAATGGTAAGGA 36070 Query 282270 GAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTT 282329 | | |||||| || |||||||| | ||| || || | | || ||||||| | Sbjct 36071 GGGAAACATCGAATGTACCACCACCGAGATCGAAGATTA--AAATG--TTTCTTTCACCA 36126 Query 282330 ---GGTTT-TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 282385 | ||| || || |||||||| |||| ||| ||||||||||||||||| ||||| | Sbjct 36127 ACAGATTTCTTTTCGAGACCATAGGCAATAGCGGCAGCAGTTGGTTCATTGATAATACGT 36186 Query 282386 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 282445 || || | |||||| | || ||||| || || ||||| | ||| |||||||| Sbjct 36187 TGGACGTTTAATTTGGCAATTGTACCAGCATCCTTGGTAGCTTGACGTTGGGAATCGTTG 36246 Query 282446 AAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTT-CCAATATAAGCGCTTGC 282504 ||||| || || ||||| |||||||| | |||| | | || |||| |||| || Sbjct 36247 AAATAAGCTGGGACAGTGATAACGGCGT-TGTTGATGGTCTTACCAAGGTAAGATTCAGC 36305 Query 282505 TGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--AGAATATTGCTTG 282562 |||| |||||| || | || ||| || || | || |||||| |||| || ||| Sbjct 36306 GGTTTCTTTCATCTTGAGGAGAACCATAGAGGAGACTTCTTCTGGGGAGAAAGTT--TTG 36363 Query 282563 GATTCAT-TTTGATATGATACTTCAAAATATGGTTTATTACCAACATT---AATAACTTT 282618 | |||| ||||| | | | || | |||||||| | ||| | || || |||||| Sbjct 36364 GTTTCACCTTTGAATTCA-ATTTGGAGGTATGGTTTGTCACCTTCTTTGGCAACAACTTT 36422 Query 282619 AAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAA 282678 |||||||||| ||||||||| | ||| || ||| || | | ||| ||||| Sbjct 36423 GAATGGCCAATGTTTCATATCAGCTTGGACGACAGATTCAGAGAATTTACGACCGATTAA 36482 Query 282679 TCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATC 282738 ||||| |||||||| || || |||||||| || | ||| |||||| ||||| ||||| Sbjct 36483 ACGTTTGGCATCAAAGATGGTGTTGGTTGGGTTCATGGCAACTTGATTCTTGGCAGCATC 36542 Query 282739 TCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTG 282798 ||||| | ||| | || | || | ||| || |||||||| || | |||||||| Sbjct 36543 ACCAATTAATCTTTCATTGTCATTGAAAGCAACGTAGGATGGAGTGGTTCTGTTACCTTG 36602 Query 282799 ATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGT 282858 ||| || |||||||||||||| | |||||||||| ||||| ||||| | |||| || Sbjct 36603 ATCGTTGGCAATAATTTCAACACGATCATTTTGCCAGACACCAACACATGAATAAGTAGT 36662 Query 282859 TCCTAAATCAATACCAATAG 282878 ||||||||||||||||||| Sbjct 36663 ACCTAAATCAATACCAATAG 36682 >seq830 Length=6844 Score = 210 bits (232), Expect = 2e-48 Identities = 793/1227 (65%), Gaps = 39/1227 (3%) Strand=Plus/Minus Query 281438 AGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA 281497 |||||||| ||| |||||| ||||| | |||||||||||| ||||| ||||| ||| Sbjct 1768 AGAATACCGTTGACATCCATTTCAAAAGAGACTTCAATTTGTGGGACACCTCTGGCAGCT 1709 Query 281498 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 281557 ||||| || || | | |||| | || || || |||||||| || | ||| Sbjct 1708 GGTGGAATACCGCTGAGTTCAAATTTACCGAGGAGATGGTTATCTTTGGTCATGGAACGT 1649 Query 281558 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 281617 ||||| || || ||||| || |||| ||| |||||| ||| || | || ||| Sbjct 1648 TCACCTTCAAAGATTTGAATCAAAACTTTGTCTTGGTTATCTTGATAGGTAGAGAAAACT 1589 Query 281618 CTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCA 281677 ||||| || || | || | || | ||||||| |||||| Sbjct 1588 TGAGATTTCTTGGTTGGGACATAGGTACCACGTGGGATGAGGGCAGTCATAACTCCACCA 1529 Query 281678 GCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTT 281737 | ||||| | ||| || | | || | | ||| | ||||||| | | | Sbjct 1528 ACAGTTTCAATACCGAGGGTTAATGGGGCAATATCCAAAAGGACAACGTCGCCAGTGGAT 1469 Query 281738 TCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 281797 || ||| ||||| || | | | |||||| ||||||||||| || || |||||| Sbjct 1468 TCTTCA-TTTGATAAA-----ACACCACCTTGAACGGCAGCACCATAAGCGACGGCTTCA 1415 Query 281798 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCT 281856 || ||||| ||| || | || ||| ||||||||||||||| | || || || |||| | Sbjct 1414 TCTGGATTGACACCTTGACTTGGTTCTTTACCATTGAAAAAGTCTTTTAATAA-TTGTTT 1356 Query 281857 TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 281916 ||||| || ||||||| || || || || | || ||||| | | | ||||| | Sbjct 1355 AACCTTTGGGATACGAGTGGAACCACCGACAAGAACGATTTCGTCGATTTCGGATTTTTT 1296 Query 281917 CAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGA 281976 ||||| | || ||||||||||| || ||||| ||| | | || | || Sbjct 1295 GAGTTTGGCGTCTTGTAAAACTTTTTTGACTGGTTCGAGAGTCTTTTTGAAGAGATCCAT 1236 Query 281977 ACAAAGTTCTTCGAATTTAGCTCTAGT-AAGAGTGACATTATAATCAATTCCTTCGAACA 282035 |||||||| ||||| || | || ||| | ||||| |||| ||| | | || Sbjct 1235 GTTGAGTTCTTCAAATTTGGCACGGGTCAAGGTTTCCATTA-AATC--TTCA--CCACCA 1181 Query 282036 AAGAA----TCAACTTCAATCGTAGTT-TGAGTCGAAGAAGATAGTGCACGTTTAGCACG 282090 ||||| |||| ||||| | ||| || | || || || || || | || || Sbjct 1180 AAGAAATTTTCAATTTCAAATGGAGTGCTGTGG-GATGATGAGAGAGCTCTCTTGGCGTT 1122 Query 282091 TTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT--TGCTGATTGATTCAAATCTGTTTTA 282148 |||| ||| | || ||| || | | || ||| || | || || ||| | | Sbjct 1121 TTCAGCGGCTCTTCTGAGTTTTTGGAGGGATTTCTTGTCTTTGGAGGCA--TCTTTACCA 1064 Query 282149 TATTTTCTCTTGAAATCTTCAACACACC----ATGTTACAAGAC--GATTATCAAAATCT 282202 | |||| ||| ||| |||| ||||| || ||| | | |||||||||| Sbjct 1063 G-TCTTCTTTTGGAAT-----ACACTGAGGAAATGTTTCATGACACGTTGATCAAAATCT 1010 Query 282203 TCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGA 282262 ||||| || || | |||| || || | | |||| || | || | |||| Sbjct 1009 TCACCACCTAAATGGGTATCACCATTGGTTGATAAGACTTCAAATACACCCTTATCAATG 950 Query 282263 GACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT 282322 | ||| | || |||||| || |||||||| | |||| | | || |||||| |||| Sbjct 949 GTCAAGACAGAGACATCAAATGTACCACCACCAAGATCATAGACGAGAACATTCTTTTCA 890 Query 282323 TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATT 282382 || ||| || ||| ||| || || ||||| ||||| ||||||||||| |||| Sbjct 889 TTACCTTTGTCGC---CAAAACCGTAGGCCAAAGCGGCAGCGGTTGGTTCATTGATAACA 833 Query 282383 CTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCG 282442 | ||||| || ||||||||||| || |||||||| |||||||| | ||| | ||| Sbjct 832 CGTAAAACTTTGAGACCAGCAATAACACCAGCATCTTTGGTGGCTTGACGTTGGGCATCA 773 Query 282443 TTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTT 282502 || ||||| || ||| ||||||||||| | || || || |||| || | Sbjct 772 TTGAAATAAGCTGGACAGGTAATAACGGCGTGAGTAACAGTTTGACCAAGGAAATCTTGA 713 Query 282503 GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTG 282562 || | | | |||| || |||||||||| | |||||||| |||||| ||| | ||| Sbjct 712 GCAATATCTCTCATCTTTGTTAAAATCATGGCTGAAATTTCTTCTGGTGAAAAAGTCTTT 653 Query 282563 GATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAAT 282622 |||| || | || || ||||||||||| | |||||||| |||| || Sbjct 652 TCTTCACCTTTAACCTTGACGGAAACGTATGGTTTATTGGCTTTATTAATAATTTTATAT 593 Query 282623 GGCCAATATTTCATATCTGATTGAACA 282649 || | ||||||||||| ||||||| Sbjct 592 GGTAATAATTTCATATCTCTTTGAACA 566 Score = 138 bits (152), Expect = 8e-27 Identities = 157/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 282667 TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATA 282726 |||||||||||| ||||| |||||||| ||||| |||||| | | ||||||| Sbjct 481 TCTACCAATTAAACGTTTAATATCAAAAACGGTATTTTCTGGATTGAGGGTGGCTTGATT 422 Query 282727 TTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGT 282786 ||| || || || ||||| || ||| | || || || | |||||||||||||| | Sbjct 421 TTTAGCAGCTTCACCAATGAGTCTTTCAGATTCAGTGAAAGCTACATATGATGGAGTGAT 362 Query 282787 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 282846 || |||||||| ||||| ||||| ||||| ||||| |||||| | ||||| ||||| Sbjct 361 ACGGTTACCTTGGTCATTGGCAATGATTTCTACTTTTTTATTTTGGAAAACACCAACACA 302 Query 282847 ACTAAAAGTTGTTCCTAAATCAATACCAATA 282877 | | || || || ||||||||||||||| Sbjct 301 AGAGTATGTGGTACCCAAATCAATACCAATA 271 >seq463 Length=19281 Score = 125 bits (138), Expect = 5e-23 Identities = 190/265 (72%), Gaps = 9/265 (3%) Strand=Plus/Minus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 ||||| ||||||| ||||| || ||||| ||||| | || ||| | |||| ||| | Sbjct 15622 TGTACATTAATTTTAACAGAAGGTGATTCTGCTAAGTCTTTGGCTGTTGCTGGTATTAGT 15563 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416 ||| |||||| ||||| ||||| | ||| ||||| | ||| |||||| ||||| | Sbjct 15562 GTTGTTGGAAAAGATTTGTATGGTGCTTTTCCACTCAAAGGTAAACTTCAAAATGTACGT 15503 Query 400417 GATGCTAGTCCTaaaa--aaaTTGCCGATAATGAGGAAATTACAGCAATCaaaaaaaTTG 400474 ||| | | | ||| ||| || ||||||||||||| | |||| || || | Sbjct 15502 GATATGACTTTTGAAAGTAAAATGA--ATAATGAGGAAATCAATAACATCATTAATATAG 15445 Query 400475 TTGGACTTGAAC--AAGGAAAAGTTTATGATGATCTCAAAGGTTTACGATATGGTAGTAT 400532 |||| ||| ||| || ||||| ||||| ||| | |||| || |||||||| ||| Sbjct 15444 TTGGTCTTCAACATAATAAAAAG--TATGAAGATGTATCAGGTCTAAGATATGGTCATAT 15387 Query 400533 TATGATTCTTGCTGATCAAG-ATGT 400556 ||||||| | |||||||||| |||| Sbjct 15386 TATGATTATGGCTGATCAAGTATGT 15362 >seq558 Length=14431 Score = 122 bits (134), Expect = 7e-22 Identities = 237/345 (69%), Gaps = 14/345 (4%) Strand=Plus/Minus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 ||||||||||||||||| || | ||| | || || ||||| |||| || | Sbjct 846 TTATCAAAATCTTCACCACCGAGGAAAGTGTCACCGTTGGTGGCTCTGACTTCAAAGACA 787 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 ||| | ||| |||| | | | |||| || |||||||| | |||| | | Sbjct 786 CCACCGACAATTTCTAAAATACTGATATCAAATGTACCACCACCTAAATCATAGACGGCA 727 Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 ||| || || | ||||| || | || |||||| || |||||||| || |||||| Sbjct 726 ACAGTCTTTGGATCGTCTT-----TTTTGAA-ACCATAGGCTAAAGCAGCGGCGGTTGGT 673 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 ||||| ||||| | |||||||| | ||| | ||| | || |||||| | |||||||| Sbjct 672 TCATTGATAATACGTAAAACATTTAAACCTGAAATGGTACCAGCATCTCTGGTGGCTTGA 613 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT-ACTTCTTTTCC 282489 | ||| | ||||| |||||| || || || ||||||||||||| |||| || | || Sbjct 612 CGTTGGGCATCGTCAAAATAGGCTGGTACGGTAATAACGGCAT-TGTTGACAGC---ACC 557 Query 282490 AATATAAGCGCTT---GCTGTTTGTTTCATTTTACTTAAAATCAT 282531 | |||| ||| || |||| |||||||||| | || | ||| Sbjct 556 ACCTAAAGCACTTTCGGCGGTTTCTTTCATTTTATTCAAGACCAT 512 >seq699 Length=10131 Score = 104 bits (114), Expect = 2e-16 Identities = 102/129 (79%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 131174 ATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTT 131233 ||| | || || || || || |||||||||||||| |||||||| |||||||| ||||| Sbjct 6122 ATTATTGTGGCAACGATTGCTTTTGGTATGGGTATCAATAAACCAAATGTTAGATTTGTT 6063 Query 131234 ATTCATTACGGAGCTCCCAAGAATATT-GAAGGTTATTATCAAGAAATTGGTAGAGCAGG 131292 |||||| || | | || | | ||| ||||| || |||||||| | |||||||||||| Sbjct 6062 ATTCATCAC-TCGTTACCTAAATCATTGGAAGGATACTATCAAGAGAGTGGTAGAGCAGG 6004 Query 131293 TCGTGATGG 131301 |||||||| Sbjct 6003 ACGTGATGG 5995 >seq660 Length=11422 Score = 100 bits (110), Expect = 2e-15 Identities = 132/179 (74%), Gaps = 3/179 (2%) Strand=Plus/Plus Query 637113 AAAGAAAATTATTG-TCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGAC 637171 ||| || | ||||| | |||| | | || |||||||| |||||||| | ||| ||| | Sbjct 736 AAAAAAGAGTATTGGTAGATTTTGCATCACCAAATATGTCTAAAGAACTTCATGCTGGTC 795 Query 637172 ATTTAAGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAA-ATGTGTGGACAC 637230 || ||||||||| | ||||||||||| ||||||| | |||||| || || || || Sbjct 796 ATCTAAGATCAATTGCACTTGGTGAATCTGTTTGTAGAATTTTAGAATATATG-GGTCAT 854 Query 637231 GATGTTTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGC 637289 |||||| | | |||| ||||| ||||||| || || | | | |||||| | ||||| Sbjct 855 GATGTTGAAAGAATTAGTCATGCTGGTGATTTTGGTACACCAATGGGTATGGTCATTGC 913 >seq86 Length=60505 Score = 96.9 bits (106), Expect = 3e-14 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 465722 ACAACTGGACATGGTAGTGTCCGATTTAATCCTAATTTATATGCTGATGGAAAAGTTTGC 465781 ||||| || |||||| ||| |||| ||||| ||| |||| | |||| || || || Sbjct 23077 ACAACAGGTCATGGTTCTGTTAGATTCAATCCCAATCTATACAATAATGGCAAGGTATGT 23136 Query 465782 CTATCTATTTTGGGAACTTGGCGGGGACAAGCAGGTGAATCATGGATTCCCGGAGTATCT 465841 | ||| | ||||| || ||| | ||| || |||||| |||||| ||| | ||| Sbjct 23137 TTGTCTCTATTGGGTACATGGAGTGGAGGCGCCGGTGAAACATGGAATCCAAGCACATCC 23196 Query 465842 AGTATGTTACAAGTTATGATTTCTATTCAATCTTTGGTACTTATTTCAGAACCTTATTTT 465901 | | | || ||||| | | || || ||||||||| | | | ||||||| || ||| Sbjct 23197 ACTCTCTTGCAAGTACTTGTATCAATCCAATCTTTGATCTTGGTACCAGAACCCTACTTT 23256 Query 465902 AATGAACCAGGATATGAA 465919 ||||||||||| |||||| Sbjct 23257 AATGAACCAGGTTATGAA 23274 >seq529 Length=15923 Score = 89.7 bits (98), Expect = 4e-12 Identities = 209/306 (68%), Gaps = 11/306 (4%) Strand=Plus/Plus Query 69629 GAGTCCTCCTGGTTGTAACCTGTATAACTTGCAATTGCAACAATAGAATTTTCACCAGCA 69688 || || ||||| || ||||| | ||| ||||||| || ||| || ||||| |||||| Sbjct 12817 GAATCTTCCTGATTATAACCAGAATATGTTGCAATGGCTACACAAGCATTTTGACCAGCT 12876 Query 69689 GGGAAAATATGTGTTCCTGTATATTTTG-AT-GCACGAGATGTTACGAGTGGTATTTGCG 69746 || || | | | |||| || | || | ||||| || || | |||| |||| | Sbjct 12877 GGTAAT-TCTCTAAAA-TGTAAATACTCCATAGAACGAGTGGTAACCAATGGTTTTTGTG 12934 Query 69747 GATGATACAGAATATAACTGAT---ATCTGTTCTTTCTCTGTAATCAGAAATATATAATC 69803 ||| | ||| || || | || ||| | | | |||| | |||||| | | Sbjct 12935 GATAAAACAAAACATGAGCCATTGTATCCATACGAAGTTGATAATTTGTAATATAAACAC 12994 Query 69804 CCATAGCTTGTCTGGCTTGATTGTA-CTGGAAAA-TACCACGAGGAGATTGATTATGATC 69861 ||||||||||| | | || | | || || || || |||||| |||||||||||||| Sbjct 12995 CCATAGCTTGTTTACCC--ATAGCAGCTTGATAAGTATTACGAGGTGATTGATTATGATC 13052 Query 69862 TGGGAAAGGAATATTAGATGAAATTAGTCCGAGAATCATACACGGATGAATTTCACAATG 69921 ||| ||||||||| | || || | || | |||||| | ||||||||||||||||| Sbjct 13053 TGGAAAAGGAATAATGGAACAACAAATACCTAAAATCATGGATGGATGAATTTCACAATG 13112 Query 69922 AGTGTA 69927 ||| || Sbjct 13113 AGTATA 13118 >seq145 Length=45608 Score = 86.0 bits (94), Expect = 5e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 445285 CATACAAAATTATAATTTTAGATGAAGCCGATTCAATGACAGATGAAGCTCAAGATGCTT 445344 |||| ||| | || |||||||||||||| |||||||||||| || ||| ||| || Sbjct 17232 CATATAAATTAATTATTTTAGATGAAGCAGATTCAATGACAAATATAGCACAAACAGCAC 17173 Query 445345 TAAGGGTAATTATTGAACAATATAGTACAGCAACTAGATTTTGTTTTATTTGTAATTATA 445404 | || | |||||||| |||||| | | | || ||||||||| | ||||||||||| Sbjct 17172 TGAGAAGAGTTATTGAAAAATATACAAAAACCACAAGATTTTGTATAGTTTGTAATTATG 17113 Query 445405 TCACCAAAATTA 445416 | | || |||| Sbjct 17112 TTATAAAGATTA 17101 >seq98 Length=57420 Score = 86.0 bits (94), Expect = 5e-11 Identities = 223/332 (67%), Gaps = 16/332 (5%) Strand=Plus/Plus Query 399175 ACTTATGTACCTGGTCTATATAAAATTTATGATGAAGTAATTGTAAATGCGGCAGATCAT 399234 |||||| ||| ||| | | || || ||||| ||| || | |||||||| |||||| || Sbjct 14540 ACTTATACACCAGGTTTGTTAAAGATCTATGACGAAATATTGGTAAATGCTGCAGATAAT 14599 Query 399235 AAC--AAGAGATGTCAAACATGTAATATTATCAAAGTTGATATCGATCAAAAAACAGGTC 399292 || ||||||| || | |||| || |||| |||||||| || || | || | || Sbjct 14600 AAACAAAGAGATTCCACA-ATGTCAT-TTATTAAAGTTGAAATTGACCCAACCTC---TC 14654 Query 399293 AA---ATTTCTGTTTGGAATAATGGTGATGGTATTGATGTAGCAATTCATAAAGAACATA 399349 || |||||| || ||| |||| | ||||| ||| | ||| |||||| ||| | Sbjct 14655 AATCAATTTCTATTATGAACGATGGAAAGGGTATACCTGTTGTAATGCATAAA--ACAGA 14712 Query 399350 ATATATGG---GTACCATCAATGATTTTTGGAGAACTTTTAACGTCTACTAATTACGATA 399406 | | ||| ||| |||| || | || | ||| | | | | |||| | || Sbjct 14713 ACA-ATGCTATGTAGTTGAAATGGTTATGGGTAATCTTATGTCTGGTTCAAATTTCAATG 14771 Query 399407 AAAACGAGGAAAAAACTGTTGGTGGTAAAAATGGTTTTGGCGCTAAGCTTGCTAATATTT 399466 | |||||| |||| |||||||| | |||||||||||| || || | | || || | Sbjct 14772 ACAACGAGTTAAAAGTAGTTGGTGGAAGAAATGGTTTTGGTGCAAAATTGACAAACATAT 14831 Query 399467 ATTCTGTTGAATTTACTATTGAAACAGTAGAT 399498 ||| ||||||| | ||||||| || ||| Sbjct 14832 TTTCAAAAGAATTTATTGTTGAAACTGTTGAT 14863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740570110389528