Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq98 84.2 1e-11 >seq98 Length=57420 Score = 84.2 bits (92), Expect = 1e-11 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 65087 CGTGTTCCAAACTGACCATTTGGCAT-TAATAAATTAATATTGTTTGAACCAATAAAATT 65145 || || ||||| |||||| ||||| ||||| ||| || ||||| |||| | | | Sbjct 16785 CGAGTACCAAATTGACCACC-GGCATATAATAGTGGAATGTTATTTGATCCAACATAGCT 16727 Query 65146 CTGAGCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATG 65205 || ||||| | ||||| ||||| | |||||||| || ||||| | | ||| Sbjct 16726 TTGTGCCATCTTTACAATTGTAGCATTGAGGGAAGCTTCACCATGGTGATAGGCAGTATG 16667 Query 65206 TTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAA 65265 ||||| ||||| ||| |||||||||||||| ||||| | |||| || | || || Sbjct 16666 TTCAGCAACATAACCAGACAATTGAGCAACTTTAATTTCAGAGGTTAGCTTTCTCTTGAA 16607 Query 65266 TGCA-GAATACAATATTTT 65283 ||| | |||||||||||| Sbjct 16606 -GCATGCATACAATATTTT 16589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235676472754200