Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polysphondylium_20violaceum_20[genbank_20GCA_5F000277445.1_202012- 07-09] 1,228 sequences; 25,723,383 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq778 170 5e-37 seq79 161 2e-34 seq57 161 2e-34 seq298 141 2e-28 seq1179 123 6e-23 seq393 118 3e-21 seq992 98.7 2e-15 >seq778 Length=8042 Score = 170 bits (188), Expect = 5e-37 Identities = 172/224 (77%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 |||||| || || | |||||| || ||||||||||||| ||||| || | |||||||| Sbjct 4700 AAGTCTGAGAACTAAGTGGAGGGTTGATTCTTTTTGGATGTTGTAGTCAGATAAAGTTCT 4759 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 |||||||||| || || || || ||||| | |||||||| ||||| || |||||||| Sbjct 4760 ACCATCTTCTAATTGTTTACCGGCAAAGATTAAACGTTGTTGATCGGGTGGGATACCTTC 4819 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 |||||||||||||| ||| || |||||||||||| || ||| || || | || Sbjct 4820 TTTGTCTTGGATCTTGGCCTTGACGTTTTCGATGGTGTCAGAACCTTCGACTTCGAGAGT 4879 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTAT 225718 ||| ||||| || || || ||||| | ||| | |||||| |||| Sbjct 4880 GATGGTCTTACCAGTTAAGGTTTTAACGAAGATTTGCATGTTAT 4923 >seq79 Length=61457 Score = 161 bits (178), Expect = 2e-34 Identities = 167/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 |||||| ||||| | || ||||| ||||||||||||| ||||| || | |||||||| Sbjct 10763 AAGTCTGAGGACTAAATGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGATAAAGTTCT 10822 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 |||||||||| || || || || || || | |||||||| ||||| || |||||||| Sbjct 10823 ACCATCTTCTAATTGTTTACCGGCAAAAATTAAACGTTGTTGATCGGGTGGGATACCTTC 10882 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 |||||||||||||| ||| || ||| ||||||||||| ||| || || | || Sbjct 10883 TTTGTCTTGGATCTTGGTCTTAACGTTTTCAATGGTGTCTGAACCTTCGACTTCAAGAGT 10942 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| || ||||| ||||| | ||| | |||||| Sbjct 10943 AATAGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 10981 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| ||||| | |||||||| ||||||||||||| |||||||| | ||||| | Sbjct 10308 AGTCTGAGGACTAAATGGAGAGTAGATTCTTTTTGGATGTTGTAATCAGATAAAGTACGA 10367 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| | ||||| ||||| ||||| | |||||||| ||||| ||||||||||| Sbjct 10368 CCATCTTCCAATTGCTTACCAGCAAAGATTAAACGTTGTTGATCGGGTGGAATACCTTCT 10427 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 |||||||| || || || ||| ||| ||||||||||| ||| || || | || Sbjct 10428 TTGTCTTGAATTTTAGTTTTAACATTTTCAATGGTGTCTGAACCTTCGACTTCAAGAGTA 10487 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || ||||| ||||| | ||| | |||||| Sbjct 10488 ATGGTTTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 10525 Score = 149 bits (164), Expect = 1e-30 Identities = 165/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| ||||| | || ||||||||||||||||||| ||||| || | || ||||| || Sbjct 10994 TCTAAGGACCAAATGAAGAGTGGATTCTTTTTGGATGTTGTAGTCAGATAAGGTTCTACC 11053 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||| || || || || ||||| | |||||||| ||||| || |||||||| || Sbjct 11054 ATCTTCTAATTGTTTACCGGCAAAGATTAAACGTTGTTGATCGGGTGGGATACCTTCTTT 11113 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| || || ||| ||| ||| || || || ||| ||| || || | ||||| Sbjct 11114 GTCTTGAATTTTAGTCTTTACATTTTCAATAGTATCAGAGCCTTCGACTTCAAGGGTGAT 11173 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTA 225717 || ||||| || |||||||| | || | ||||||| || Sbjct 11174 GGTTTTGCCAGTTAAAGTTTTAACAAAAATTTGCATTATA 11213 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 |||||| ||||| | |||||||||||||| ||||| | || || || | ||||| | Sbjct 10079 AAGTCTGAGGACTAAATGGAGAGTGGATTCCTTTTGAATGTTATAGTCAGATAAAGTACG 10138 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 || ||||||| || || || ||||| || |||| |||||| ||||| || |||||||| Sbjct 10139 ACCGTCTTCTAATTGTTTACCGGCGAAAATGAGTCTTTGTTGATCGGGTGGGATACCTTC 10198 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 ||| ||||| |||||| ||| || ||| ||||| || ||| ||| || || | || Sbjct 10199 CTTATCTTGAATCTTTGTCTTAACGTTTTCAATGGTATCAGAGCCTTCGACTTCAAGGGT 10258 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| || ||||| ||||| | ||| | |||||| Sbjct 10259 AATAGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 10297 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| || || | |||||||| ||||||||||||| ||||| || | ||||| | Sbjct 10536 AGTCTGAGAACTAAATGGAGAGTAGATTCTTTTTGGATGTTGTAGTCAGATAAAGTACGA 10595 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || ||||||| || || || ||||| || |||| |||||| ||||| || |||||||| Sbjct 10596 CCGTCTTCTAATTGTTTACCGGCGAAAATGAGTCTTTGTTGATCGGGTGGGATACCTTCT 10655 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 |||||||| || || ||| ||| ||| || || || ||| ||| || || | ||| Sbjct 10656 TTGTCTTGAATTTTAGTCTTTACATTTTCAATAGTATCAGAGCCTTCAACTTCAAGGGTG 10715 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || |||||||| | ||| | |||||| Sbjct 10716 ATGGTTTTACCAGTTAAAGTTTTGACGAAAATTTGCAT 10753 >seq57 Length=71319 Score = 161 bits (178), Expect = 2e-34 Identities = 167/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 |||||| || || | || ||||||||||||||||||| |||||||| | |||||||| Sbjct 43880 AAGTCTAAGAACTAAATGAAGAGTGGATTCTTTTTGGATGTTGTAATCAGATAAAGTTCT 43939 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 |||||||||| || || || ||||| || | |||||||| ||||| ||||||||||| Sbjct 43940 ACCATCTTCTAATTGTTTACCGGCGAAAATTAAACGTTGTTGATCGGGTGGAATACCTTC 43999 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 |||||||| ||||| ||| || ||| || ||||||||| ||| || || | || Sbjct 44000 TTTGTCTTGAATCTTGGTCTTGACGTTTTCAATAGTGTCTGAGCCTTCGACTTCAAGAGT 44059 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || ||||| || || | ||| | |||||| Sbjct 44060 AATGGTTTTACCAGTCAAGGTCTTGACGAAAATTTGCAT 44098 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| ||||| | || ||||||||||||||||| | |||||| || | |||||||| Sbjct 44109 AGTCTGAGGACTAAATGAAGAGTGGATTCTTTTTGAATATTGTAGTCAGATAAAGTTCTA 44168 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||||| || || ||||| || ||||||| |||||| ||||| || ||||||||| Sbjct 44169 CCATCTTCTAATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCGGGTGGGATACCTTCC 44228 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || ||||| ||||| ||| ||| ||||||||| || || ||| || || | || Sbjct 44229 TTATCTTGAATCTTGGTCTTGACATTTTCGATGGTATCAGAACCTTCGACTTCAAGGGTA 44288 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || | |||||| | || | |||||| Sbjct 44289 ATGGTTTTACCAGTGAGAGTTTTAACAAAAATTTGCAT 44326 Score = 156 bits (172), Expect = 1e-32 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 |||||| || || | |||||||| ||||||||||||| ||||||||| | ||| || | Sbjct 43196 AAGTCTAAGAACTAAATGGAGAGTAGATTCTTTTTGGATATTGTAATCAGACAAGGTACG 43255 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 |||||||||| || || || ||||| || | |||||||| ||||| || |||||||| Sbjct 43256 TCCATCTTCTAATTGTTTACCGGCGAAAATTAAACGTTGTTGATCGGGTGGGATACCTTC 43315 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 ||| ||||| ||||| ||| ||| ||||||||| || || ||| || || | || Sbjct 43316 CTTATCTTGAATCTTGGTCTTGACATTTTCGATGGTATCAGAACCTTCGACTTCGAGGGT 43375 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| || ||||| || || | ||| | |||||| Sbjct 43376 AATGGTCTTACCAGTCAAGGTCTTAACGAAAATTTGCAT 43414 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| ||||| | ||||| || ||||||||||||| || || || | ||||| | Sbjct 43653 AGTCTGAGGACTAAATGGAGGGTAGATTCTTTTTGGATGTTATAGTCAGATAAAGTACGA 43712 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || ||||||| || || || ||||| ||||||| |||||| ||||| ||||||||||| Sbjct 43713 CCGTCTTCTAATTGTTTACCGGCGAAAATAAGTCTTTGTTGATCGGGTGGAATACCTTCT 43772 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 |||||||| ||||| || || ||| ||||| || || ||| || || | || Sbjct 43773 TTGTCTTGAATCTTGGTTTTAACGTTTTCAATGGTATCAGAACCTTCAACTTCAAGAGTA 43832 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| || ||||| || || | ||| | |||||| Sbjct 43833 ATGGTCTTACCAGTCAAGGTCTTAACGAAAATTTGCAT 43870 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| || || | ||||| || ||||| ||||||| || || || | ||||| | Sbjct 42969 AGTCTGAGAACTAAATGGAGGGTAGATTCCTTTTGGATGTTATAGTCAGATAAAGTACGA 43028 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || ||||||| || || ||||| || || | |||||||| ||||| ||||||||||| Sbjct 43029 CCGTCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGATCGGGTGGAATACCTTCT 43088 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 |||||||| ||||| ||| || ||||||||| || ||| ||| || || | || Sbjct 43089 TTGTCTTGAATCTTGGTCTTGACGTTTTCGATGGTATCAGAGCCTTCGACTTCAAGGGTA 43148 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || ||||| || || | ||| | |||||| Sbjct 43149 ATGGTTTTACCAGTCAAGGTCTTGACGAAAATTTGCAT 43186 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| || || | |||||||| ||||| ||||||| ||||| || | ||||| | Sbjct 43425 AGTCTAAGAACTAAATGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTACGA 43484 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || | || || ||||| ||||| | |||||||| ||||| || |||||||| Sbjct 43485 CCATCCTCCAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCGGGTGGGATACCTTCT 43544 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 |||||||| || || || ||| ||| |||||||||||| ||| || || | || Sbjct 43545 TTGTCTTGAATTTTAGTTTTAACATTTTCAATGGTGTCTGAGCCTTCTACTTCAAGAGTA 43604 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || | |||||| | || | |||||| Sbjct 43605 ATGGTTTTACCAGTGAGAGTTTTAACAAAAATTTGCAT 43642 >seq298 Length=27992 Score = 141 bits (156), Expect = 2e-28 Identities = 128/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| ||||| | ||| || || ||||||||||||| |||||||||| ||||| | Sbjct 13184 AGTCTGAGGACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAATCGGATAAAGTACGA 13243 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || ||||||| || || ||||| |||||||||| |||||| ||||| || |||||||| Sbjct 13244 CCGTCTTCTAATTGTTTACCAGCAAAGATAAGTCTTTGTTGATCGGGGGGGATACCTTCT 13303 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGA 225656 ||||||||||| || ||| ||| ||||||||| || || Sbjct 13304 TTGTCTTGGATTTTAGCCTTGACATTTTCGATGGTATCGGA 13344 >seq1179 Length=2421 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| || || | ||| ||||||||||||||||| | || || || | || ||||| Sbjct 2420 AGTCTAAGTACCAAGTGAAGAGTGGATTCTTTTTGAATGTTATAGTCAGATAAGGTTCTA 2361 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| | || || || || || ||||||| |||||| ||||| ||||||||||| Sbjct 2360 CCATCTTCCAATTGTTTACCTGCAAAAATAAGTCTTTGTTGATCGGGTGGAATACCTTCT 2301 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || ||||| || || || ||| || || || || || ||| || || | ||| Sbjct 2300 TTATCTTGAATTTTAGTTTTAACATTATCAATTGTATCGGAACCTTCAACTTCAAGGGTG 2241 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || |||||||| || | || | |||||| Sbjct 2240 ATAGTTTTACCAGTCAAAGTCTTGACAAAAATTTGCAT 2203 Score = 122 bits (134), Expect = 2e-22 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | || ||||||||||||||||| | ||||| || | ||||||||| || Sbjct 2190 TCTGAGAACTAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 2131 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| | || || || || ||||| | |||||||| ||||| || |||||||| || Sbjct 2130 GTCTTCCAATTGTTTACCTGCAAAGATTAAACGTTGTTGATCGGGTGGGATACCTTCTTT 2071 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||| || || ||| || || || || || ||| ||| || || | ||||| Sbjct 2070 ATCTTGAATTTTAGTCTTGACGTTATCAATTGTATCAGAGCCTTCAACTTCAAGGGTGAT 2011 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || || || || ||||| | ||| | ||||||| Sbjct 2010 GGTTTTACCAGTTAAGGTTTTAACGAAAATTTGCATT 1974 >seq393 Length=22713 Score = 118 bits (130), Expect = 3e-21 Identities = 109/137 (80%), Gaps = 1/137 (1%) Strand=Plus/Minus Query 7735 TTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCT 7794 ||||||||||| || | |||||||| |||||||| |||||||||| |||| ||| Sbjct 3617 TTGGTAAGATTTTTCGTGTTATATCGAATTAAACTTCATACTCCACTGCTTGCGCAAATC 3558 Query 7795 TCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTT-ACG 7853 ||||||| |||| ||||||||||| |||||| ||||| | |||||| ||| | ||| ||| Sbjct 3557 TCCGTCAATTTCCTTGAGTTTTAATCTTGCGATCGTACTTCTCAGGCGGAGTGTTTAACG 3498 Query 7854 CGTTAGCTTAATTAATA 7870 |||| || || || || Sbjct 3497 TGTTAACTCAAATACTA 3481 Score = 105 bits (116), Expect = 2e-17 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||||||||| ||||| ||||| || |||| |||||| || ||||| || || ||||| || Sbjct 1911 GAATATTTGTCCATCTGTAATTGAAATAATATTTGTTGGAATATATGCTGATACATCTCC 1852 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCAC 4570 |||||||||||| |||| || || ||||||| |||||||| Sbjct 1851 TGCTTGTGTTTCTACAATTGGGAATGCTGTTAATGATCCAC 1811 Score = 89.7 bits (98), Expect = 1e-12 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 8126 AAAACTTTCCAACCTAATCGCATTAATTGGTCATATCTATACCTTGGCAAAGTTGCCCTG 8185 || |||||||||||||| ||||||||| ||||||||||| ||||| ||||||||||| Sbjct 5651 AATACTTTCCAACCTAAATACATTAATTGATCATATCTATATCTTGGTAAAGTTGCCCTT 5592 Query 8186 ACTCATATAAAAGCGAATA 8204 || |||||||| | |||| Sbjct 5591 ACCCATATAAATGTAAATA 5573 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 372634 AATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGT 372693 || ||||||||||||||||||| |||||||||||||||| || || | | || | ||||| Sbjct 10115 AAGAGAGGGTAGCGACTGTTTAATAAAAACACAGGACTCTGCAAAATGGCAACATGATGT 10174 Query 372694 ATAGGGTCTGACAC 372707 ||||||||||| || Sbjct 10175 ATAGGGTCTGATAC 10188 >seq992 Length=4136 Score = 98.7 bits (108), Expect = 2e-15 Identities = 85/104 (82%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||||||||||||||| || ||||||||||| || | || ||||| || || ||| Sbjct 1223 TTCAGGATGACCAAAAAACCAAAATAAATGTTGGTATAATATTGGATCTCCCCCTCCTAT 1282 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774 |||||||||||| | || | |||||||||||| ||||| |||| Sbjct 1283 TGGATCAAAAAATGTTGTTTCAAAATTTCTATCTGTTAATAACA 1326 Score = 95.1 bits (104), Expect = 3e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 7561 AACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATG 7620 ||||| ||||| || | |||| || |||||||||||||| | || ||||| | ||| Sbjct 1786 AACGTAATTATCACATCACATGGGTTAATTATGATTTTCTTTGTAGTAATGCCAGCGATG 1727 Query 7621 ATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTT 7680 |||| || || || ||||| ||| | || |||||| | || |||||||| | || ||| Sbjct 1726 TTAGGAGGATTTGGTAATTGGTTCATACCATTAATGGTAGGAGCTCCTGACGTAGCATTT 1667 Query 7681 CCAAGGCTTAACAATATAAG 7700 ||||| | |||||||| || Sbjct 1666 CCAAGATTAAACAATATTAG 1647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192512437012232