Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2462 86.0 1e-11 seq2321 86.0 1e-11 seq1793 86.0 1e-11 seq1497 86.0 1e-11 seq939 86.0 1e-11 seq374 86.0 1e-11 seq274 86.0 1e-11 >seq2462 Length=40176 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| | || |||| | ||||||| |||||||||| Sbjct 27044 GCCCGTCTAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGGGGGTTCGAGC 26985 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 26984 CCCCCGGTGGGC 26973 >seq2321 Length=12391 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| | || |||| | ||||||| |||||||||| Sbjct 120 GCCCGTCTAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGGGGGTTCGAGC 179 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 180 CCCCCGGTGGGC 191 >seq1793 Length=3181 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| | || |||| | ||||||| |||||||||| Sbjct 100 GCCCGTCTAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGGGGGTTCGAGC 159 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 160 CCCCCGGTGGGC 171 >seq1497 Length=16015 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| | || |||| | ||||||| |||||||||| Sbjct 15695 GCCCGTCTAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGGGGGTTCGAGC 15754 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 15755 CCCCCGGTGGGC 15766 >seq939 Length=26743 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| | || |||| | ||||||| |||||||||| Sbjct 26200 GCCCGTCTAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGGGGGTTCGAGC 26259 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 26260 CCCCCGGTGGGC 26271 >seq374 Length=135736 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| | || |||| | ||||||| |||||||||| Sbjct 24161 GCCCGTCTAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGGGGGTTCGAGC 24220 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 24221 CCCCCGGTGGGC 24232 >seq274 Length=21642 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| | || |||| | ||||||| |||||||||| Sbjct 470 GCCCGTCTAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGGGGGTTCGAGC 529 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 530 CCCCCGGTGGGC 541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057789072965510