Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq2030 89.7 4e-13 seq637 89.7 4e-13 >seq2030 Length=13636 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 18969 TTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTA 19028 || |||| || ||||| ||||||| ||| ||||| ||||| || || || || || ||| Sbjct 12417 TTGATGGCCCTTCCTCCTTGTCACATGTTTTGTCAATTTTATGTGGCCAATGGCGAGTTA 12476 Query 19029 TCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGC 19087 || ||||| | ||||||||||| | || ||||| | || || || ||||||||||| Sbjct 12477 TCTTGCCAGATGTACCAGAGATCAGCCGACATGGGATTAGGTGTTCCCTTCAACATTGC 12535 >seq637 Length=38019 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 18969 TTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTA 19028 || |||| || ||||| ||||||| ||| ||||| ||||| || || || || || ||| Sbjct 11306 TTGATGGCCCTTCCTCCTTGTCACATGTTTTGTCAATTTTATGTGGCCAATGGCGAGTTA 11365 Query 19029 TCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGC 19087 || ||||| | ||||||||||| | || ||||| | || || || ||||||||||| Sbjct 11366 TCTTGCCAGATGTACCAGAGATCAGCCGACATGGGATTAGGTGTTCCCTTCAACATTGC 11424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399491452702965