Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq2030 123 2e-23 seq637 123 2e-23 >seq2030 Length=13636 Score = 123 bits (136), Expect = 2e-23 Identities = 226/341 (66%), Gaps = 40/341 (12%) Strand=Plus/Plus Query 20216 AGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTG 20275 |||| ||| | || || ||||| |||| ||||||||||||| ||| || ||||||| | Sbjct 12195 AGGGTGATCTAGGACCAGTGTACGGATGGCAATGGAGACATTATGGCGCCAAATATGTCG 12254 Query 20276 ACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAA 20335 ||||| |||| ||||| ||| ||||| | |||||| | |||||||| || | || Sbjct 12255 ACATGTACACCGATTATACTGGTCAAGGTTTTGATCAACTCCAAAATGTGATAGACACAA 12314 Query 20336 TTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCT-----AAAGA 20390 |||| | |||||||| || |||||||| || ||| ||| |||||| || ||| Sbjct 12315 TTAAGAATAACCCAAATGATAGAAGAATAATCTTAACCGCTTGGAACCCTTCTGGTAAGT 12374 Query 20391 TGTGC-----------------------------------CTTTAATGGCTTTGCCTCCA 20415 ||| | ||| ||||| | ||||| Sbjct 12375 TGTCCTAAAATTACCATCTCTGATCGTATCTTAGACCTCGGTTTGATGGCCCTTCCTCCT 12434 Query 20416 TGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAA 20475 ||||| ||| | || |||||||| || || ||| || || || || || ||||| || Sbjct 12435 TGTCACATGTTTTGTCAATTTTATGTGGCCAATGGCGAGTTATCTTGCCAGATGTACCAG 12494 Query 20476 CGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGC 20516 |||| || || |||||| | |||||||| ||||| ||||| Sbjct 12495 AGATCAGCCGACATGGGATTAGGTGTTCCCTTCAACATTGC 12535 >seq637 Length=38019 Score = 123 bits (136), Expect = 2e-23 Identities = 226/341 (66%), Gaps = 40/341 (12%) Strand=Plus/Plus Query 20216 AGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTG 20275 |||| ||| | || || ||||| |||| ||||||||||||| ||| || ||||||| | Sbjct 11084 AGGGTGATCTAGGACCAGTGTACGGATGGCAATGGAGACATTATGGCGCCAAATATGTCG 11143 Query 20276 ACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAA 20335 ||||| |||| ||||| ||| ||||| | |||||| | |||||||| || | || Sbjct 11144 ACATGTACACCGATTATACTGGTCAAGGTTTTGATCAACTCCAAAATGTGATAGACACAA 11203 Query 20336 TTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCT-----AAAGA 20390 |||| | |||||||| || |||||||| || ||| ||| |||||| || ||| Sbjct 11204 TTAAGAATAACCCAAATGATAGAAGAATAATCTTAACCGCTTGGAACCCTTCTGGTAAGT 11263 Query 20391 TGTGC-----------------------------------CTTTAATGGCTTTGCCTCCA 20415 ||| | ||| ||||| | ||||| Sbjct 11264 TGTCCTAAAATTACCATCTCTGATCGTATCTTAGACCTCGGTTTGATGGCCCTTCCTCCT 11323 Query 20416 TGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAA 20475 ||||| ||| | || |||||||| || || ||| || || || || || ||||| || Sbjct 11324 TGTCACATGTTTTGTCAATTTTATGTGGCCAATGGCGAGTTATCTTGCCAGATGTACCAG 11383 Query 20476 CGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGC 20516 |||| || || |||||| | |||||||| ||||| ||||| Sbjct 11384 AGATCAGCCGACATGGGATTAGGTGTTCCCTTCAACATTGC 11424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399171462753265