Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq2030 105 6e-18 seq637 105 6e-18 >seq2030 Length=13636 Score = 105 bits (116), Expect = 6e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 ||||| ||| || ||||||| || | |||||||| ||| ||||| || || Sbjct 12580 AGGCCGCAGACTTGGGCGATCATCACAGTTAAAAGGGCGTAAGAGGCAATGTTGAAGGGA 12521 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || || | ||||||||||| || |||||||||| |||||| || | ||| || ||| Sbjct 12520 ACACCTAATCCCATGTCGGCTGATCTCTGGTACATCTGGCAAGATAACTCGCCATTGGCC 12461 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTC 21163 || ||||| ||||| || | |||||||||||| || |||||| ||||||| Sbjct 12460 ACATAAAATTGACAAAACATGTGACAAGGAGGAAGGGCCATCAAACCGAGGTC 12408 >seq637 Length=38019 Score = 105 bits (116), Expect = 6e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 ||||| ||| || ||||||| || | |||||||| ||| ||||| || || Sbjct 11469 AGGCCGCAGACTTGGGCGATCATCACAGTTAAAAGGGCGTAAGAGGCAATGTTGAAGGGA 11410 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || || | ||||||||||| || |||||||||| |||||| || | ||| || ||| Sbjct 11409 ACACCTAATCCCATGTCGGCTGATCTCTGGTACATCTGGCAAGATAACTCGCCATTGGCC 11350 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTC 21163 || ||||| ||||| || | |||||||||||| || |||||| ||||||| Sbjct 11349 ACATAAAATTGACAAAACATGTGACAAGGAGGAAGGGCCATCAAACCGAGGTC 11297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427762564758960