Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2048 127 4e-24 >seq2048 Length=17775 Score = 127 bits (140), Expect = 4e-24 Identities = 224/326 (69%), Gaps = 8/326 (2%) Strand=Plus/Minus Query 218521 TTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCCAGC 218580 |||||| |||||||||||||||| |||||| | ||| || ||||| ||||| Sbjct 7267 TTCATCAACAAGGAGCTCATTCTCTTCTCGATGAGCGATTGTGAACGTTCCATTCCTTCT 7208 Query 218581 GTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGGAAC 218640 |||| || || ||||||||| |||||||| || ||||||| |||||| ||| Sbjct 7207 ATGGTCGACGGTCTCAAGCCAGGACAGCGTAAAATTCTCTTTGGAATGTTCAAGAAGAA- 7149 Query 218641 CTGGTTCAAGAA----ATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGG 218696 | ||||| | || ||||| |||||| || | | || | ||||| ||| Sbjct 7148 ---GGTCAAGGACGATATCAAGGTGGCTCAGATTGCGGCCTACATCGCCGAACAGACTGC 7092 Query 218697 CTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGT 218756 ||||||||||| ||| | |||||| | || || || ||||| ||| | ||| Sbjct 7091 GTACCATCACGGAGAGGTGTCGCTGCAGACCACGATCGTTGGTATGGCGCAGAGATTTGT 7032 Query 218757 GGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGG 218816 || |||||||| |||||| || |||| || |||||||| |||| |||| Sbjct 7031 TGGGTCCAACAACATCAACTTGTTGTACCCCGCTGGGCAGTTTGGAAATCGTGATATGGG 6972 Query 218817 TGGAAAGGATAGTGCTTCTGCCAGGT 218842 ||||||| | |||||||||||||| Sbjct 6971 TGGAAAGAACTCTGCTTCTGCCAGGT 6946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027802863077257