Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1441 134 2e-26 seq455 104 3e-17 >seq1441 Length=33442 Score = 134 bits (148), Expect = 2e-26 Identities = 297/443 (67%), Gaps = 7/443 (2%) Strand=Plus/Minus Query 114881 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTA 114940 |||||||| || |||| || || ||||| || ||||| || || || | | ||||| Sbjct 2009 TCCAAAAACTCGGTGATGTCGGCATGCCATGGCTCCAGATAAACGGCAAAGGCACCCTTC 1950 Query 114941 CG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGA 114997 | || ||| | |||| ||||| | || ||| |||| || || | |||||| || Sbjct 1949 CTCTTACCACCTCCTTGGTCGACATAACGTGCAGTGTCATTGAAGACTCTAAGCATGGGG 1890 Query 114998 ATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTG--GCTCTGACAT 115055 | || |||| ||| |||||||| || | || | ||| || ||||||| | Sbjct 1889 ACGAGTCCATTAGAGGCACCATTTGTTCCTCTGAT--GTAACTGTCTGCAGCTCTGATCT 1832 Query 115056 CATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGAC 115115 ||| || ||| || || || || | || ||||| | ||||||| | | ||| Sbjct 1831 TGTGGGCAGACAGACCGATGCCTCCGGCAGATTTAGAGATGAGAGCGCACTGCTTTAGAG 1772 Query 115116 TGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTT 115175 || ||||||| || ||||| || || |||| | | | |||||||||| ||||| | Sbjct 1771 TGTCGTAGATACCCTCGATAGAATCCTCCTTCATGTCCAAAAGGAAGCAGGAAGACATCT 1712 Query 115176 GTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGG 115235 | || |||||||| |||| |||||| || || ||||| ||||| |||| | ||||| Sbjct 1711 GAGGTCTTGGTGTGCCAGAGTTGAAAAGTGTGGGTGTGGCGTGTGTGAAAAACAGTTGGG 1652 Query 115236 ACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGA 115295 | | | || || || || | | | || |||||| | ||||||||||| || | Sbjct 1651 ATAACAGATGATATGTTTCGATGGCAGCTTTGATGTCTCTCTTGTGAATACCGACAGACA 1592 Query 115296 CCCGCATAAACATGTATTGGGGT 115318 | | | ||| | || ||||||| Sbjct 1591 CTCTGAGAAAGAGGTGTTGGGGT 1569 >seq455 Length=31299 Score = 104 bits (114), Expect = 3e-17 Identities = 195/284 (69%), Gaps = 7/284 (2%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || |||||| || ||||| || || || | ||| || || | | || || Sbjct 8570 GGCAAAGTCGCAGTGGAGTCCTTCGTCGCGAGAAATAAATTCGTTTGATGTGGAAAGACC 8629 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||||||||| | |||||||||||| || || | ||| || ||||| ||||||||||| Sbjct 8630 TGGCATGAGACCTCTCTTCTTCAACCAAAAGATGGAACAGAAGGAACCAGAGAAGAAGAT 8689 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAA 126225 ||||| || ||||| || | ||| || || | || ||| || | || | Sbjct 8690 GCCCTCTACGGCAGCGAAAGCGACGAGGCGTTCTCCGAAAGAGTCGGAATCATTG---AT 8746 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285 ||| | ||||| | |||||| || | ||| || |||| | | ||| || | || Sbjct 8747 CCAGCGAAGAGCCCAGTCCGCCTTCTTTTTGATGCAGGGGATGTGGTCGATGGCATGGAA 8806 Query 126286 GAG--TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTAT 126327 ||| || | ||| || | || || ||||||||| | ||||| Sbjct 8807 GAGCATTGC--CTTCTCGGTGGGGTCCTTGATGTACGTGTCTAT 8848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597334357747160