Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq593 123 2e-23 seq1044 116 3e-21 seq717 105 5e-18 seq1344 100 2e-16 seq1239 95.1 9e-15 seq2313 93.3 3e-14 seq2113 91.5 1e-13 seq1766 86.0 4e-12 >seq593 Length=28782 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 14964 TAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTC 15023 ||| |||||||| || || || || || || |||||||| ||||| | | |||| |||| Sbjct 15894 TAAGACTAAATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGCTTAAAGTTCTGCCGTC 15953 Query 15024 TTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC 15083 |||||||| || || ||| | || | | ||| || ||| ||| ||||| || ||||| Sbjct 15954 CTCTAATTGCTTTCCGGCGAAAATGAGTCTCTGCTGATCGGGTGGGATTCCCTCTTTGTC 16013 Query 15084 ACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT 15143 || ||| ||| ||| | || || ||||| | || || ||||||||||| || Sbjct 16014 TTGGATCTTGGCTTTGACATTGTCGATGGTATCTGAAGACTCGACTTCTAAGGTAATTGT 16073 Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || |||||||| || ||||||||||| Sbjct 16074 CTTGCCAGTGAGAGTTTTGACGAAAATTTGCAT 16106 Score = 118 bits (130), Expect = 8e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| ||||| ||||| || |||||||| || ||| |||| |||| || | || Sbjct 15448 TGAAGAGTAGATTCTTTCTGGATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCAAGCTGC 15507 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || || | || | | |||||||||| || |||||||||||||| ||| ||| Sbjct 15508 TTTCCGGCAAAAATGAGTCTCTGTTGGTCGGGAGGGATTCCTTCCTTGTCTTGAATCTTG 15567 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || |||||||| |||||| |||||||| ||||| || || || Sbjct 15568 GCCTTAACATTGTCGATAGTATCTGAGGATTCTACTTCTAAGGTGATGGTCTTGCCGGTG 15627 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 |||||||| |||||||| ||||| Sbjct 15628 AGAGTTTTGACAAAAATCTGCAT 15650 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| | | ||| || ||||| || ||||| || || || |||||||||||||| Sbjct 16108 CCACCTCTAAGACGTAATACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAATCGCTC 16167 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | | | ||||||| || || || || ||| | || | | |||||| ||| ||| Sbjct 16168 AAAGTGCGGCCGTCTTCCAACTGCTTTCCGGCGAAGATGAGTCTCTGTTGATCGGGTGGG 16227 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| || ||| |||||| | || || || || | | || || Sbjct 16228 ATTCCTTCCTTGTCTTGGATCTTGGCCTTTACATTATCGATTGTGTCTGAACTCTCCACT 16287 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || | || || || || || || || || || || || |||||||| || Sbjct 16288 TCGAGTGTGATTGTCTTTCCAGTTAGTGTCTTAACGAAGATTTGCATGTT 16337 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||| ||||| || || || || ||||| ||| ||| | | |||| || | || Sbjct 15675 ATGAAGAGTAGACTCCTTCTGGATATTGTAGTCGGAAAGAGTACGTCCGTCCTCAAGCTG 15734 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || || || | || | | |||||| ||| ||| |||||||||||||| ||| || Sbjct 15735 CTTTCCGGCAAAGATGAGTCTCTGTTGATCGGGTGGGATTCCTTCCTTGTCTTGAATCTT 15794 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || ||| | |||||||| || | | ||||| || | ||| || || || ||||| Sbjct 15795 GGCCTTCACATTATCTATAGTGTCTGAACTCTCTACTTCGAGGGTGATTGTCTTTCCTGT 15854 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 || ||| || || ||||| ||||| Sbjct 15855 CAAAGTCTTGACGAAAATCTGCAT 15878 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | |||||| ||||| || || || ||||| || || ||| ||| |||| || Sbjct 28450 AACCAGATGAAGAGTAGACTCCTTCTGAATGTTATAGTCTGAGAGGGTTCGGCCGTCCTC 28509 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 |||||| || || ||| | || | | |||||| || ||||||||||||||||| Sbjct 28510 TAATTGCTTTCCGGCGAAGATGAGTCTCTGTTGATCAGGGGGAATTCCTTCCTTGTCTTG 28569 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 || ||| ||||||| | || || ||||| | ||||| || | || || || || Sbjct 28570 TATCTTGGCTTTTACATTGTCGATGGTATCTGAGCTCTCTACTTCGAGTGTGATTGTCTT 28629 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || || || || || |||||||| Sbjct 28630 TCCAGTGAGGGTCTTGACGAAGATTTGCAT 28659 >seq1044 Length=18651 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || ||||||||||| ||||| ||||||||||| || || || | | | ||||| Sbjct 18577 ACCAAGTGAAGGGTAGACTCTTTCTGTATGTTGTAGTCACTCAGTGTGCGTCCATCTTCC 18518 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||| || |||||| | || | | |||||||||| ||| ||||| |||||||| Sbjct 18517 AGTTGCTTTCCAGCGAAGATGAGTCTCTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGT 18458 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| ||||||| | || || ||||| | | || || || || || || || || Sbjct 18457 ATCTTGGCTTTTACATTATCGATGGTATCTGAACTCTCGACTTCCAATGTGATTGTCTTG 18398 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || || || || ||||| || |||||||| || Sbjct 18397 CCGGTGAGTGTCTTTACGAAGATTTGCATGTT 18366 >seq717 Length=13837 Score = 105 bits (116), Expect = 5e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || |||||||| |||||||| ||| ||| | | | | || ||||| || Sbjct 188 TGGAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAGAGGGTGCGCCCATCCTCTAACTGC 247 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | ||||| | |||||| ||| || |||||||||||||| ||| ||| Sbjct 248 TTTCCGGCGAAGATCAATCTCTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGAATCTTG 307 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || || | || || || ||| ||||| || || ||||| || || ||||| Sbjct 308 GCCTTGACGTTATCGATGGTGTCGGAGGACTCTACTTCCAAAGTAATAGTCTTTCCTGTG 367 Query 15154 AGAGTTTTTACAAAAATTTGCATATT 15179 || || ||||| ||||| ||||| || Sbjct 368 AGGGTCTTTACGAAAATCTGCATGTT 393 >seq1344 Length=40060 Score = 100 bits (110), Expect = 2e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTT 15025 || || |||||||| || || || || |||||||| || ||||| | || | || | Sbjct 24000 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTC--TGAGAGTGTGCGTCCATCCT 24057 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | | ||| || || ||| | || | | |||||||||| |||||||||||||| || Sbjct 24058 CCAGTTGCTTTCCGGCGAAGATGAGTCTCTGTTGGTCGGGGGGAATTCCTTCCTTATCTT 24117 Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 || ||| ||| ||| | || ||||| || | ||| || || ||||| || || | Sbjct 24118 GGATCTTGGCTTTAACATTGTCGATAGTGTCTGAAGATTCGACTTCCAAGGTGATTGTCT 24177 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || || |||||||| ||||| |||||||| Sbjct 24178 TGCCGGTGAGAGTTTTGACAAAGATTTGCAT 24208 >seq1239 Length=29077 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || ||||| ||||| || || || ||||| ||||| || || || ||||||||||| | Sbjct 23116 CCTCCTCGTAATCTCAACACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAATCTGAG 23175 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | ||||| || || || ||||| | || | | |||||||||| || Sbjct 23176 AGAGTGCGGCCATCTTCCAACTGCTTTCCAGCAAAGATGAGTCTCTGTTGGTCGGGAGGG 23235 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| || ||| || || | || || || || | || || Sbjct 23236 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACC 23295 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| || || ||||| || || ||||| || ||||| Sbjct 23296 TCCAAAGTGATGGTCTTTCCGGTCAGGGTCTTGACAAAGATCTGCAT 23342 Score = 86.0 bits (94), Expect = 4e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| |||||| || || | |||||||| || ||||| || || ||||| || | Sbjct 23344 CCTCCTCTCAATCTCAACACGAGGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCTGAG 23403 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | || |||| || | ||| || || ||| | || | | ||||||||| || Sbjct 23404 AGGGTCCTGCCGTCCTCGAGTTGCTTTCCGGCGAAAATGAGTCTTTGTTGGTCGGGAGGG 23463 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| ||| ||| || || | || || || || | || || Sbjct 23464 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACC 23523 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || || || ||||| || || |||| ||||||||||| || ||||| || Sbjct 23524 TCCAAAGTGATGGTCTTTCCGGTCAATGTTTTTACAAAGATCTGCATGTT 23573 >seq2313 Length=44285 Score = 93.3 bits (102), Expect = 3e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || || || ||||| ||||||||||| |||||||| |||| | || || | || Sbjct 27619 TGGAGTGTGGACTCTTTCTGTATGTTGTAGTCGCTGAGGGTTCTTCCATCCTCCAGCTGC 27560 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || |||||| | || | | ||||||||| || ||||| ||||| || || ||| Sbjct 27559 TTTCCAGCGAAGATGAGTCTCTGTTGGTCTGGGGGTATTCCCTCCTTATCTTGGATCTTG 27500 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 |||||| | || || || || | || || || || || ||||| || || || Sbjct 27499 GCCTTTACATTGTCGATGGTGTCTGAGCTCTCGACTTCCAAAGTGATGGTCTTTCCGGTT 27440 Query 15154 AGAGTTTTTACAAAAATTTGCATATT 15179 | ||| ||||||||||| ||||| || Sbjct 27439 AAAGTCTTTACAAAAATCTGCATGTT 27414 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || || || || ||||| |||||||| |||||||| |||| |||| |||| || Sbjct 27847 TGGAGCGTGGACTCCTTTTGAATGTTGTAGTCGCTGAGGGTTCTTCCGTCCTCTAGCTGC 27788 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | || | | ||||||||| |||||| ||||||||||| || || Sbjct 27787 TTTCCGGCGAAGATGAGTCTCTGTTGGTCTGGTGGAATGCCTTCCTTGTCTTGGATCTTA 27728 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || || | ||||| ||||| | ||| || || | ||| || || || || || Sbjct 27727 GCCTTGACGTTGTCTATTGTATCTGAAGATTCAACTTCGAGGGTGATTGTCTTTCCAGTG 27668 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || || ||||| || || ||||| Sbjct 27667 AGGGTCTTTACGAAGATCTGCAT 27645 >seq2113 Length=21246 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| || || || || || || ||||| ||||||||| |||| |||| || | || Sbjct 20896 TGAAGAGTGGACTCCTTCTGGATATTGTAGTCGCTGAGAGTTCTACCGTCCTCAAGCTGC 20837 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | || | | |||||||||| || ||||| ||||| || ||| ||| Sbjct 20836 TTTCCGGCGAAAATGAGTCTCTGTTGGTCGGGGGGGATTCCCTCCTTATCTTGAATCTTG 20777 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || || ||| || || || | ||| ||||| || || ||| Sbjct 20776 GCCTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTTCCGGTC 20717 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 | ||| || || ||||||||||| Sbjct 20716 AAAGTCTTCACGAAAATTTGCAT 20694 >seq1766 Length=5059 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| ||| | | ||| | |||||| ||||| || || || ||||| || || | Sbjct 4482 CCTCCTCTCAAGCGAAGAACGAGATGAAGAGTAGACTCCTTCTGAATGTTATAGTCTGAG 4541 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || ||| |||| |||||||| || || || | || | | |||||| || ||| Sbjct 4542 AGGGTTCGGCCGTCCTCTAATTGCTTTCCGGCAAAAATGAGTCTCTGTTGATCAGGGGGA 4601 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| || ||| ||||||| | || || || || | ||||| Sbjct 4602 ATTCCTTCCTTGTCTTGGATCTTGGCTTTTACATTGTCGATGGTGTCTGAGCTCTCTACT 4661 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || || || || || || || || || || || |||||||| Sbjct 4662 TCGAGTGTGATTGTCTTTCCAGTGAGGGTCTTGACGAAGATTTGCAT 4708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357380775322445