Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq455 113 7e-20 >seq455 Length=31299 Score = 113 bits (124), Expect = 7e-20 Identities = 174/248 (70%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 159911 TTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTG 159970 || || || ||||| |||||||||||||| ||||| ||||| ||||| || || ||||| Sbjct 8556 TTGAAGAGCAGGCAGGCAAAGTCGCAGTGGAGTCCTTCGTCGCGAGAAATAAATTCGTTT 8615 Query 159971 GACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCA 160030 || || || || ||||||| || | | || | |||||| |||| || | | Sbjct 8616 GATGTGGAAAGACCTGGCATGAGACCTCTCTTCTTCAACCAAAAGATGGAACAGAAGGAA 8675 Query 160031 CCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCG 160090 || || ||||| ||||| ||||| || || || ||||| | || || ||||| | Sbjct 8676 CCAGAGAAGAAGATGCCCTCTACGGCAGCGAAAGCGACGAGGCGTTCTCCGAAAGA---G 8732 Query 160091 TTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGC 160150 | || |||| | |||| | ||||| || ||||||||| |||||| || ||| | Sbjct 8733 TCGGAATCATTGATCCAGCGAAGAGCCCAGTCCGCCTTCTTTTTGATGCAGGGGATGTGG 8792 Query 160151 TCGACGGC 160158 |||| ||| Sbjct 8793 TCGATGGC 8800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795129586063120