Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1441 107 2e-18 seq455 98.7 1e-15 seq1881 82.4 9e-11 >seq1441 Length=33442 Score = 107 bits (118), Expect = 2e-18 Identities = 158/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 109421 TACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTTGGAAAGTG 109480 |||| || ||||| || ||||| ||||| | ||||| || | |||| | || | Sbjct 3445 TACCAGTCTTGAGTCCCTTTTTCCAAGCGTAAAAGTGCATAGAGGTGAGTCTTGATGGGT 3386 Query 109481 TCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAG 109540 ||| | | | ||||||||| | || ||||||||||| | || |||||||| | Sbjct 3385 CCGGTTTGGCAACAAACAAGTTGAAAGATTGAGACTGATCCACAAAAGCTCCACGATCTG 3326 Query 109541 CCGCCATGTCGATGA-TACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTG 109599 | ||||||| ||| | ||| || | || ||||||||||||||||||||||| | ||| Sbjct 3325 CGGCCATGTTGATCAATACCCTCTGGGA-AATTTCCCAGACAGTCTTGTACATGTCCTTC 3267 Query 109600 ATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACC 109640 | || | || |||| || ||||| |||||| || ||||| Sbjct 3266 AGGTCCTGGGAAATGCCCTCGATGCCTTGAATGGAACCACC 3226 >seq455 Length=31299 Score = 98.7 bits (108), Expect = 1e-15 Identities = 157/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGC--AAAGT 119552 |||||| || || || ||||| || ||||| || | || || ||| | |||| Sbjct 8570 GGCAAAGTCGCAGTGGAGTCCTTCGTCGCGAGAAATAAATTCGTT--TGATGTGGAAAGA 8627 Query 119553 CCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAG 119612 || |||||||| ||||| ||||| | ||||||||||| ||| || ||||| |||||| Sbjct 8628 CCTGGCATGAGACCTCTCTTCTTCAACCAAAAGATGGAACAGAAGGAACCAGAGAAGAAG 8687 Query 119613 ATGCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAG-GTCGAGACTTGTCGAA 119671 |||||||| || |||||||||| || || || | |||| |||| || | | || Sbjct 8688 ATGCCCTCTACGGCAGCGAAAGCGACGAGGCGTTCTCCGAAAGAGTCG-GAATCATTGAT 8746 Query 119672 CCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGA 119712 ||| |||||||||| ||||| | |||||||||| Sbjct 8747 CCAGCGAAGAGCCCAGTCCGCCTTCTTTTTGATGCAGGGGA 8787 >seq1881 Length=25171 Score = 82.4 bits (90), Expect = 9e-11 Identities = 110/151 (73%), Gaps = 4/151 (3%) Strand=Plus/Minus Query 119507 ATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAG--CAAAGTCCAGGCATGAGT 119564 ||| ||||||||||| | || |||| ||||| ||| | ||| || ||||||| Sbjct 18030 ATGTAGCCCTTCATCTCTTGATATGAATTCATT--TGATTTTCCAAGACCCTCCATGAGT 17973 Query 119565 CCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACA 119624 || || ||||| ||||||||||||| || || |||||||||||||| ||||||||| Sbjct 17972 CCCCTCTTCTTCAGCCAAAAGATGGAGCAGAAGGAACCAGAAAAGAAGATACCCTCCACA 17913 Query 119625 CAGGCGAAAGCGAATAGACGCTCAGCAAAAG 119655 || || || | || | ||| |||||| Sbjct 17912 GCAGCAAAGGCAACGAGTCTCTCTCCAAAAG 17882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588957027610600