Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq2030 84.2 3e-11 seq637 84.2 3e-11 >seq2030 Length=13636 Score = 84.2 bits (92), Expect = 3e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 104993 GGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATATCGAC 105052 |||||| |||||||| | || |||| |||||||||||| ||| || ||||| ||||| Sbjct 12197 GGTGATCTAGGACCAGTGTACGGATGGCAATGGAGACATTATGGCGCCAAATATGTCGAC 12256 Query 105053 -TGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAGAAACTAT 105111 ||| | ||||| ||||| || |||||| | || ||| | | || ||||| || || Sbjct 12257 ATGT-ACACCGATTATACTGGTCAAGGTTTTGATCAACTCCAAAATGTGATAGACACAAT 12315 Query 105112 AAAAAATAACCCCGGGTGTCGAAGAATAAT 105141 || |||||||| | |||||||||| Sbjct 12316 TAAGAATAACCCAAATGATAGAAGAATAAT 12345 >seq637 Length=38019 Score = 84.2 bits (92), Expect = 3e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 104993 GGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATATCGAC 105052 |||||| |||||||| | || |||| |||||||||||| ||| || ||||| ||||| Sbjct 11086 GGTGATCTAGGACCAGTGTACGGATGGCAATGGAGACATTATGGCGCCAAATATGTCGAC 11145 Query 105053 -TGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAGAAACTAT 105111 ||| | ||||| ||||| || |||||| | || ||| | | || ||||| || || Sbjct 11146 ATGT-ACACCGATTATACTGGTCAAGGTTTTGATCAACTCCAAAATGTGATAGACACAAT 11204 Query 105112 AAAAAATAACCCCGGGTGTCGAAGAATAAT 105141 || |||||||| | |||||||||| Sbjct 11205 TAAGAATAACCCAAATGATAGAAGAATAAT 11234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658381991186920