Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq455 172 1e-37 seq1441 154 3e-32 >seq455 Length=31299 Score = 172 bits (190), Expect = 1e-37 Identities = 295/424 (70%), Gaps = 8/424 (2%) Strand=Plus/Plus Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 ||||| ||| ||||| ||||||| || | || ||| ||| || |||||| || || Sbjct 8394 AGCAGTCTATCGGCGACAAACTCGATATACTGTGTCATCAGGTTGGCGTTCATTCCAATC 8453 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 || || |||||||||| |||| |||||||||||| || |||||| || | Sbjct 8454 AGACCAACTGGCAAAGCCTCGGTGACAAACTCCTTCTCGCACTCCACGGCGTCAAGGATG 8513 Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGT-GCTTGGCATAGAGCATGCA 48132 |||| ||| ||| | |||| || | ||| | | || || || |||||| ||| Sbjct 8514 ATCTTCTTCACG---GTCTCTT-GGCTGGGTTTCTCTTGTAGCATGTTGAAGAGCAGGCA 8569 Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192 ||||||||| | ||| | |||||||| || || | |||| || | | ||||| Sbjct 8570 GGCAAAGTCGCAGTGGAGTCCTTCGTCGCGAGAAATAAATTCGTTTGATGTGGAAAGACC 8629 Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252 ||||||| || |||| || | ||| || || | ||| || |||||||||||||| Sbjct 8630 TGGCATGAGACCTCTCTTCTTCAACCAAAAGATGGAACAGAAGGAACCAGAGAAGAAGAT 8689 Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312 |||||| || || ||||| ||| ||| | ||||||||||| || || ||| Sbjct 8690 GCCCTCTACGGCAGCGAAAGCGACGAGGCGTTCTCCGAAAGA---GTCGGAATCATTGAT 8746 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372 |||| ||| |||||||| |||||||| |||||||| || || || ||||| |||| Sbjct 8747 CCAGCGAAGAGCCCAGTCCGCCTTCTTTTTGATGCAGGGGATGTGGTCGATGGCATGGAA 8806 Query 48373 GAGC 48376 |||| Sbjct 8807 GAGC 8810 >seq1441 Length=33442 Score = 154 bits (170), Expect = 3e-32 Identities = 677/1068 (63%), Gaps = 110/1068 (10%) Strand=Plus/Minus Query 212862 TCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGG 212921 |||||||||||||| ||| || | || || || || ||| |||||| || | Sbjct 3159 TCCTCGTTCCAGAGACCCTCGGCCAAGAGATCCTCCACGAGTTGACGGTTGATGATGGTG 3100 Query 212922 AAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCG 212981 || || || | | || || || ||| | ||| |||||||| ||||||| || ||| Sbjct 3099 AATTCTCCCGCCAAAACTCTTCTGCTGTACATGTTGGAAGTGTAAGGCTCGAAGCACTCA 3040 Query 212982 TTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTC 213041 ||||| || | |||||| | |||| | || ||||||||||| || |||| ||| ||| Sbjct 3039 TTGTTGCCTAAAATCTGCGAAGTGGTAGCGGTGGGCATGGGGGCAACCAAGAGGGAGTTA 2980 Query 213042 CTCACTCCGTG---CT-CGCCGA---------------TGAGGCG--------CC--GA- 213071 | | |||||| || | ||| ||||| | || || Sbjct 2979 CGGATTCCGTGAATCTACAACGAGTCAATATGATGTCGTGAGGGGAAGTCATACCTTGAT 2920 Query 213072 ----------AGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCA 213121 || |||||||||||||||||| |||| ||| || |||||||| Sbjct 2919 CTTGGCTTTGAGATCTGCCCAGTCCCATCTGTCAGAT-GGT--------TTGACGTTCCA 2869 Query 213122 CATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCC 213181 ||||||| |||| | ||| || ||| || || | ||| |||| | ||| || Sbjct 2868 CATGTCATACTGGAGGATTCCCTTGGAAACAGGACAGCCGGGGTAGGTCTCGTAATATCC 2809 Query 213182 ATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATAT 213241 | | | ||||||||| ||| || | ||| || ||||||| || || | || Sbjct 2808 CTCCACAGCGGCCAGCTCCATGGATGCGGTGACGGCGGCAAAGTAGATCGTCTCCGAGAT 2749 Query 213242 CTCCCTGTTGAGCTTCTTGGCCTC---TGGGGACGTGAAGGGCATCATCATGCGTTGGAA 213298 || | ||| || | || | ||| ||| | | ||||| | || | ||| || Sbjct 2748 GTCGCGGTTCAGAT-CTGCGGCTCCATTGGAGTCA--AAGGGGAG--TCG-GAGTTTGAT 2695 Query 213299 CACA---TCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAG-ACT 213354 | | || |||| ||||| | |||| ||||||||||||||||||| ||| | | Sbjct 2694 GAAAGTGTCGGCCAAACCCTGAATTCCGAGACCGATGGGTCTGTGTCTCATGTTGCTATT 2635 Query 213355 TGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGG 213414 | ||| ||| | |||||| |||| | |||||||||||||||||| || ||| Sbjct 2634 TTTAGC-CTCAGGGATGGGGTAGTAGTTTCCGTCGATGATCTTGTTGAGATTCTTAGTGA 2576 Query 213415 CCACTTTGGTGACATGG-----GCCAGGTACTCGTGA----TTGAACACGT-AGCCCCCG 213464 ||| |||||||| || | ||| | || | |||| |||| | || || Sbjct 2575 TCACCTTGGTGACCTGAAGAATGTCAGAAAGTCTCAAAGTCTTGATGACGTCATACCTCG 2516 Query 213465 TCCTGC---------------------------ACAAACTCAGGCAGGGCGATGCTGGCC 213497 | | || ||||||| |||||||||||| ||| Sbjct 2515 TACAGCTTGTGGTGGTCAAATTTGTTGTCCTTGACAAACTTGGGCAGGGCGATGGATGCC 2456 Query 213498 AGGTTGCAAACGGCCACCTC---CTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGG 213554 || ||||| || || ||||| ||| | | ||||||||||| ||||||||||||| | Sbjct 2455 AGATTGCACACCGCAACCTCATCCTGCG---CAGTGTACTCCATAATCTCGGTGCACAAG 2399 Query 213555 TTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTG 213614 ||||| | |||||| || |||||||| ||||| |||| |||||| | |||||| Sbjct 2398 TTGCTAGACTTGATGGTTCCGAGGTTCTGTTGGTTGCTCTTTCTGTTGGCGGCGTCCTTG 2339 Query 213615 TAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTAC 213674 |||||||| || || | |||||||| | ||| || ||| || | ||| || | | Sbjct 2338 TAGAGCATATAAGGTGTTCCGGTCTCAATCTGAGAGTCCAAGATGGAGAACCACAGATCC 2279 Query 213675 CTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCG 213734 |||||||| | | ||| | ||| || || || ||||||| | ||| | || Sbjct 2278 TGGGCCTTGATCGTCTTTCTGGCGAGTCCCGGTGTGGCTTCGTACTTGTTGTACAACTGC 2219 Query 213735 TTGAATTCGTGGCCCCAGACCCTGTCCAGTCCC--GGACAGGATGCGGGACACATGAGGC 213792 | || || | ||||||||| || || ||| || | | |||||| | | | Sbjct 2218 TCAAACTCCTCTCCCCAGACCTCGTGGAGACCCTTGGCTTCGTT--GGGACAGAATAAGG 2161 Query 213793 TCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCC 213840 |||||| || || || ||||||| ||| ||||| || |||| || Sbjct 2160 ACCAGTCTCCATCTTCCTCCACTCTCTTCATAAACAGATCGGGGATCC 2113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931502792999680