Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1441 100 1e-16 >seq1441 Length=33442 Score = 100 bits (110), Expect = 1e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 25958 GCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAG 26017 || ||||| | || | |||||| | ||||||||||||||||||||| | ||||| || Sbjct 2063 GCGTAAAAGAGGTCACGTGCTCTCCTCTCTTCTTTTCCGTGATTCTTTCTGAGATCCAAA 2004 Query 26018 AAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTT 26077 || || || || | |||||||| || | ||| | ||||| ||| || || || Sbjct 2003 AACTCGGTGATGTCGGCATGCCATGGCTCCAGATAAACGGCAAAGGCACCCTTCCTCTTA 1944 Query 26078 CCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT 26137 || || ||||| || || || | |||||| |||||||| ||| | | ||| || || | | Sbjct 1943 CCACCTCCTTGGTCGACATAACGTGCAGTGTCATTGAAGACTCTAAGCATGGGGACGAGT 1884 Query 26138 CCA 26140 ||| Sbjct 1883 CCA 1881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253032052725275