Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1706 167 4e-35 seq455 156 7e-32 seq1881 134 2e-25 seq1441 129 9e-24 seq785 113 7e-19 seq2150 95.1 2e-13 seq2140 95.1 2e-13 seq1054 91.5 2e-12 seq553 91.5 2e-12 seq2557 89.7 8e-12 seq1019 89.7 8e-12 seq41 89.7 8e-12 seq2529 87.8 3e-11 seq1686 87.8 3e-11 seq1021 87.8 3e-11 >seq1706 Length=44628 Score = 167 bits (184), Expect = 4e-35 Identities = 158/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 2035560 AAGGACGACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGAC 2035619 || ||||||||| || ||| ||||| | || |||||| | |||||| |||||||| Sbjct 5729 AAAGACGACAAGTCTACAGACAACATTACTCCTTGGGACGCCGAGTTTTGCAAGGTCGAC 5788 Query 2035620 CAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTC 2035679 ||| |||| ||||| ||| | || | ||||||||||| |||||||||||||| || || Sbjct 5789 CAAGCCACACTCTTCGAGCTCATTTTGGCCGCCAACTATCTCGACATCAAGCCTCTTCTG 5848 Query 2035680 GATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGC 2035739 || ||| || ||||| || |||||| | |||||||| ||| | |||||||| ||| | Sbjct 5849 GACTTGACATGTAAGACTGTTGCCAACATGATCAAGGGAAAGACACCCGAGGAGATCAGA 5908 Query 2035740 AAGACCTTTAACATCAAGTACG 2035761 |||||||| ||||||||| ||| Sbjct 5909 AAGACCTTCAACATCAAGAACG 5930 >seq455 Length=31299 Score = 156 bits (172), Expect = 7e-32 Identities = 231/326 (71%), Gaps = 6/326 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 |||||||||||| || |||||||| | | || || |||||||| || | |||| Sbjct 8589 CCTTCGTCGCGAGAAATAAATTCGTTTGATGTGGAAAGACCTGGCATGAGACCTCTCTTC 8648 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || | ||||||||||| |||||| || ||||| ||||||||||| ||||| || || Sbjct 8649 TTCAACCAAAAGATGGAACAGAAGGAACCAGAGAAGAAGATGCCCTCTACGGCAGCGAAA 8708 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 ||||||| || || | |||| ||| || | |||||||| | ||||| Sbjct 8709 GCGACGAGGCGTTCTCCGAAAGAGTC--GG----AATCATTGATCCAGCGAAGAGCCCAG 8762 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 || ||||| || | | |||| | ||||||||| | ||||| |||||||| Sbjct 8763 TCCGCCTTCTTTTTGATGCAGGGGATGTGGTCGATGGCATGGAAGAGCATTGCCTTCTCG 8822 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 |||||||||| ||| ||||| || | ||| || || ||||| | ||| ||||| || Sbjct 8823 GTGGGGTCCTTGATGTACGTGTCTATCAAGAGAGAATAAGTCTCAGCGTGTATGTTCTCA 8882 Query 794641 ATGGCGATCTGGAAGCCATAAAAGCA 794666 ||||| || || || ||||||||||| Sbjct 8883 ATGGCAATTTGAAACCCATAAAAGCA 8908 Score = 140 bits (154), Expect = 5e-27 Identities = 232/330 (70%), Gaps = 10/330 (3%) Strand=Plus/Plus Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951 ||| || |||||||| ||||| || | ||||| || ||||||||||| || | || Sbjct 8267 GACACCAGCCTTGGCGTACTCTGAGACTCTACGCTCAAAGAAGTTGGTCTTTCCTTGCAG 8326 Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011 ||||| | ||||||| || ||||| | | || ||||||| |||| ||| Sbjct 8327 AGAGATGAGGACCATCCAATCAAAGGGGTTCTCGGCATGGAAGTGCTTGGGGCACTTGAG 8386 Query 794012 --CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069 ||||| ||||| | |||||||| || || || ||||| ||| ||| ||||||| Sbjct 8387 GGCGACG--AGCAGTCTATCGGCGACAAACTCGATATACTGTGTCATCAGGTTGGCGTTC 8444 Query 794070 ATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129 || || || || | || |||| | |||| |||||||||| |||||| ||| ||||| Sbjct 8445 ATTCCAATCAGACCAACTGGCAAAGCCTCGGTGACAAACTCCTTCTCGCACTCCACGGCG 8504 Query 794130 TCGATGATGATCTGCCTGGGCACG-TCGGACGAC--GGCTTGTCGACGAGCATCGTGTAG 794186 || | |||||||| | | |||| || | | || || || ||||| || || Sbjct 8505 TCAAGGATGATCTTCTT---CACGGTCTCTTGGCTGGGTTTCTCTTGTAGCATGTTGAAG 8561 Query 794187 AGCAGGCAGGCAAAGTCGCAATGCAGACCT 794216 |||||||||||||||||||| || || ||| Sbjct 8562 AGCAGGCAGGCAAAGTCGCAGTGGAGTCCT 8591 >seq1881 Length=25171 Score = 134 bits (148), Expect = 2e-25 Identities = 202/284 (71%), Gaps = 10/284 (4%) Strand=Plus/Minus Query 794385 CATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCC 794444 |||||| || | |||||| ||||||||||||| ||||| || || || ||||| || Sbjct 17979 CATGAGTCCCCTCTTCTTCAGCCAAAAGATGGAGCAGAAGGAACCAGAAAAGAAGATACC 17920 Query 794445 CTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGAT 794504 ||| || || |||||| | ||||| | ||| |||||| || || | |||||| Sbjct 17919 CTCCACAGCAGCAAAGGCAACGAGTCTCTCTCCAAAAGAGT------CCGAATCGTTGAT 17866 Query 794505 CCACTTCATCGCCCACTCTGCCTT-TTTCCTCACCGAGGGCACCGTG-TCGATGGCGCGA 794562 ||| ||| |||||||||||||| ||| | | ||| | ||| ||||| ||| | Sbjct 17865 CCAGCGCATTGCCCACTCTGCCTTCTTTTGTATGCAAGG--AATGTGATCGATAGCGTGG 17808 Query 794563 AAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTC 794622 || | | ||| |||||| | || || || |||||||| || || ||||| || Sbjct 17807 AATAAGAGGTGCTTCTCTTTCTCATCTCGGATATACGTGTCGATCAGAAGAGAGTATGTT 17748 Query 794623 TCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || | || ||||| || ||||| ||||| |||||||||||||| Sbjct 17747 TCGGCATGTATGTTCTCTATGGCAATCTGAAAGCCATAAAAGCA 17704 Score = 93.3 bits (102), Expect = 7e-13 Identities = 173/254 (68%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 793963 CCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCA 794022 ||||||| ||| |||||| ||| | ||||||| | || || || | || | Sbjct 18274 CCATCCAATCGAAAGGGTTGAGCGTGTTGAAGTGCTTGGGGTTGCCAAGGGATACCAGAA 18215 Query 794023 GGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCG 794082 | || || ||||| ||||| |||||||| |||| || | || ||||| |||||||| Sbjct 18214 GACGATCCGCGACAAATTCGATGTACTGAGACATCAGATCTGCATTCATCCCGATGAGGC 18155 Query 794083 CCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCT 794142 | ||||| | | || |||||||||| ||||| |||||||| || | ||||||| Sbjct 18154 CGACGGGTAAGGCGTCTGTGACAAACTCCTTCTCACAATCGACGGCGTCCAAGATGATCA 18095 Query 794143 GCCTGGGCACGTCGGACGACGGCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGT 794202 | | || || || ||||||| ||||| || | | ||||| || |||| Sbjct 18094 TCTTTACGACTTCTTGTGATGGCTTGTTTCTTAGCATGCTGAATAAGAGGCAAGCGAAGT 18035 Query 794203 CGCAATGCAGACCT 794216 ||||||| || ||| Sbjct 18034 CGCAATGTAGCCCT 18021 >seq1441 Length=33442 Score = 129 bits (142), Expect = 9e-24 Identities = 199/284 (70%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||||||||| || || ||||| || ||||| | |||||||| || || || || || Sbjct 1934 TGGTCGACATAACGTGCAGTGTCATTGAAGACTCTAAGCATGGGGACGAGTCCATTAGAG 1875 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 | || || || || | ||| | | | || | | |||||| || | | ||| Sbjct 1874 GCACCATTTGTTCCTCTGATGTAACTGTCTGCAGCTCTGATCTTGTGGGCAGACAGACCG 1815 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 ||||| ||||| | || |||||||| ||||||| || || || |||||||| |||||| Sbjct 1814 ATGCCTCCGGCAGATTTAGAGATGAGAGCGCACTGCTTTAGAGTGTCGTAGATACCCTCG 1755 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || || || ||||||||||||| || ||||| || || | || || | | ||||| Sbjct 1754 ATAGAATCCTCCTTCATGTCCAAAAGGAAGCAGGAAGACATCTGAGGTCTTGGTGTGCCA 1695 Query 2073781 GCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGA 2073824 | ||||| || ||||| || || ||| | || ||||||| Sbjct 1694 GAGTTGAAAAGTGTGGGTGTGGCGTGTGTGAAAAACAGTTGGGA 1651 >seq785 Length=50439 Score = 113 bits (124), Expect = 7e-19 Identities = 173/244 (71%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 1485468 GTTGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCG 1485527 |||||||||||| || |||||||| ||||| ||||||||||| |||| ||||| ||| | Sbjct 15223 GTTGTACTTGGTCACAGCCTTGGTTCCCTCAGAGACGGCGTGTTTGGCGAGTTCTCCGGG 15164 Query 1485528 CATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGT 1485587 | ||| ||||| || || ||||||||||| | || | |||| |||||| || Sbjct 15163 GAGGATGAGGCGAACAGCAGTCTGGATCTCTCTGGAAGACAAAGTGTGCTTCTTGTT-GT 15105 Query 1485588 GCGCGCCAGGC-GGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGT 1485646 | | || || |||||||| |||| || |||| || ||||||| ||| | Sbjct 15104 AAGAGGCAAGCTTTCCGGCCTCCACAGCGATACGCTCGAAAATATCGTTGATAAAGTTAT 15045 Query 1485647 TCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCT 1485706 |||||| ||| | || ||||| || || |||| ||| || ||||| || |||| Sbjct 15044 CCATGATAACCATAGCCTTCTTGGAAATACCGGTGTCGCTGTGGACTTGCTTAAGGACCT 14985 Query 1485707 TGTA 1485710 |||| Sbjct 14984 TGTA 14981 >seq2150 Length=30306 Score = 95.1 bits (104), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84510 AGGCGCCGTAGTTTAGTGGTAAAATTCCTGCTTCGGGTGCAGGAGGCCCCGGTTCGATTC 84569 |||| || |||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct 8758 AGGCTCCATAGTTTAGAGGTAAAATTCCTGCTTCGGGTGCAGGAGGCCCGGGTTCGAGTC 8817 Query 84570 CGGGCGGCGCCC 84581 | || || |||| Sbjct 8818 CCGGTGGAGCCC 8829 >seq2140 Length=53188 Score = 95.1 bits (104), Expect = 2e-13 Identities = 169/244 (69%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 1485468 GTTGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCG 1485527 |||||||||||| || |||||||| || || || ||||||||| |||| ||||| || | Sbjct 5650 GTTGTACTTGGTCACAGCCTTGGTTCCTTCAGAAACGGCGTGCTTGGCAAGTTCTCCAGG 5591 Query 1485528 CATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGT 1485587 | ||| || || ||||| |||||||| || | || | |||| |||||| || Sbjct 5590 GAGGATGAGACGGACGGCAGTCTGGATTTCTCTGGAAGACAGAGTGTGCTTCTTGTT-GT 5532 Query 1485588 GCG-CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGT 1485646 | || || || || ||| | |||| || || | |||||||||| ||| || Sbjct 5531 AAGAGGCGAGCTTTCCAGCTTCGACGGCGATACGCTCAAAGATGTCGTTGATAAAGTTGT 5472 Query 1485647 TCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCT 1485706 |||||| ||| | || || ||||| || ||| ||| || ||||| | ||||| Sbjct 5471 CCATGATGACCATGGCCTTCTTAGAGATACCGGTGTCACTGTGGACTTGCTTCAACACCT 5412 Query 1485707 TGTA 1485710 |||| Sbjct 5411 TGTA 5408 >seq1054 Length=103491 Score = 91.5 bits (100), Expect = 2e-12 Identities = 71/84 (85%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 84498 GTTATCGACAGGAGGCGCCGTAGTTTAGTGGTAAAATTCCTGCTTCGGGTGCAGGAGGCC 84557 || ||| ||| |||| || |||||||| |||||||||||||||| |||||||||||||| Sbjct 478 GTCATCAACA--AGGCTCCATAGTTTAGAGGTAAAATTCCTGCTTTGGGTGCAGGAGGCC 421 Query 84558 CCGGTTCGATTCCGGGCGGCGCCC 84581 | ||||||| ||| || || |||| Sbjct 420 CGGGTTCGAGTCCCGGTGGAGCCC 397 Score = 89.7 bits (98), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84510 AGGCGCCGTAGTTTAGTGGTAAAATTCCTGCTTCGGGTGCAGGAGGCCCCGGTTCGATTC 84569 |||| || |||||||| |||||||||||||||| ||||||||||||||| ||||||| || Sbjct 7191 AGGCTCCATAGTTTAGAGGTAAAATTCCTGCTTTGGGTGCAGGAGGCCCGGGTTCGAGTC 7132 Query 84570 CGGGCGGCGCCC 84581 | || || |||| Sbjct 7131 CCGGTGGAGCCC 7120 >seq553 Length=21094 Score = 91.5 bits (100), Expect = 2e-12 Identities = 79/97 (81%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 84498 GTTATCGACAGGAGGCGCCGTAGTTTAGTGGTAAAATTCCTGCTTCGGGTGCAGGAGGCC 84557 || ||| ||| |||| || |||||||| |||||||||||||||| |||||||||||||| Sbjct 13652 GTCATCAACA--AGGCTCCATAGTTTAGAGGTAAAATTCCTGCTTTGGGTGCAGGAGGCC 13595 Query 84558 CCGGTTCGATTCCGGGCGGCGCCCTCCATTCTTTTTT 84594 | ||||||| ||| || || |||| | || | |||| Sbjct 13594 CGGGTTCGAGTCCCGGTGGAGCCCACTCTTTTGTTTT 13558 >seq2557 Length=65872 Score = 89.7 bits (98), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84510 AGGCGCCGTAGTTTAGTGGTAAAATTCCTGCTTCGGGTGCAGGAGGCCCCGGTTCGATTC 84569 |||| || |||||||| |||||||||||||||| ||||||||||||||| ||||||| || Sbjct 54196 AGGCTCCATAGTTTAGAGGTAAAATTCCTGCTTTGGGTGCAGGAGGCCCGGGTTCGAGTC 54137 Query 84570 CGGGCGGCGCCC 84581 | || || |||| Sbjct 54136 CCGGTGGAGCCC 54125 >seq1019 Length=3549 Score = 89.7 bits (98), Expect = 8e-12 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 84511 GGCGCCGTAGTTTAGTGGTAAAATTCCTGCTTCGGGTGCAGGAGGCCCCGGTTCGATTCC 84570 ||| || |||||||| |||||||||||||||| ||||||||||||||| ||||||| ||| Sbjct 1581 GGCTCCATAGTTTAGAGGTAAAATTCCTGCTTTGGGTGCAGGAGGCCCGGGTTCGAGTCC 1522 Query 84571 GGGCGGCGCCCTCCATT 84587 || || |||| | ||| Sbjct 1521 CGGTGGAGCCCACTATT 1505 >seq41 Length=61788 Score = 89.7 bits (98), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84510 AGGCGCCGTAGTTTAGTGGTAAAATTCCTGCTTCGGGTGCAGGAGGCCCCGGTTCGATTC 84569 |||| || |||||||| |||||||||||||||| ||||||||||||||| ||||||| || Sbjct 17271 AGGCTCCATAGTTTAGAGGTAAAATTCCTGCTTTGGGTGCAGGAGGCCCGGGTTCGAGTC 17212 Query 84570 CGGGCGGCGCCC 84581 | || || |||| Sbjct 17211 CCGGTGGAGCCC 17200 >seq2529 Length=20936 Score = 87.8 bits (96), Expect = 3e-11 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 84510 AGGCGCCGTAGTTTAGTGGTAAAATTCCTGCTTCGGGTGCAGGAGGCCCCGGTTCGATTC 84569 |||| | ||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct 61 AGGCTCTGTAGTTTAGAGGTAAAATTCCTGCTTCGGGTGCAGGAGGCCCGGGTTCGAGTC 2 Query 84570 C 84570 | Sbjct 1 C 1 >seq1686 Length=2970 Score = 87.8 bits (96), Expect = 3e-11 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 84511 GGCGCCGTAGTTTAGTGGTAAAATTCCTGCTTCGGGTGCAGGAGGCCCCGGTTCGATTCC 84570 ||| || |||||||| |||||||||||||||| ||||||||||||||| ||||||| ||| Sbjct 241 GGCTCCATAGTTTAGAGGTAAAATTCCTGCTTTGGGTGCAGGAGGCCCGGGTTCGAGTCC 300 Query 84571 GGGCGGCGCCC 84581 || || |||| Sbjct 301 CGGTGGAGCCC 311 >seq1021 Length=17123 Score = 87.8 bits (96), Expect = 3e-11 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 84511 GGCGCCGTAGTTTAGTGGTAAAATTCCTGCTTCGGGTGCAGGAGGCCCCGGTTCGATTCC 84570 ||| || |||||||| |||||||||||||||| ||||||||||||||| ||||||| ||| Sbjct 532 GGCTCCATAGTTTAGAGGTAAAATTCCTGCTTTGGGTGCAGGAGGCCCGGGTTCGAGTCC 591 Query 84571 GGGCGGCGCCC 84581 || || |||| Sbjct 592 CGGTGGAGCCC 602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915972272756303