Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1239 125 7e-24 seq1564 122 8e-23 seq593 111 2e-19 seq1441 105 6e-18 seq1378 102 8e-17 seq717 102 8e-17 seq2313 100 3e-16 seq1766 98.7 1e-15 seq343 91.5 1e-13 seq1044 89.7 5e-13 >seq1239 Length=29077 Score = 125 bits (138), Expect = 7e-24 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||||||||| |||||||| || | || ||||||||| ||||| || Sbjct 23373 GGTGGACTCTTTCTGGATATTGTAGTCTGAGAGGGTCCTGCCGTCCTCGAGTTGCTTTCC 23432 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| | || ||||||||||||||||| |||||||| ||||| ||| Sbjct 23433 GGCGAAAATGAGTCTTTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTT 23492 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | | |||||| || | |||| ||| || ||||||| || Sbjct 23493 GACGTTGTCGATGGTGTCTGAGCTCTCCACCTCCAAAGTGATGGTCTTTCCGGTCAATGT 23552 Query 133643 TTTTACGAAAATCTGCATG 133661 |||||| || ||||||||| Sbjct 23553 TTTTACAAAGATCTGCATG 23571 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | ||| | | | || || | |||||| || Sbjct 23146 GTAGACTCCTTCTGAATGTTGTAATCTGAGAGAGTGCGGCCA-TCTTCCAACTGCTTTCC 23204 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| | ||| |||||||||||||| ||||||||||| |||||| ||| Sbjct 23205 AGCAAAGATGAGTCTCTGTTGGTCGGGAGGGATACCTTCCTTGTCTTGGATCTTGGCCTT 23264 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | | |||||| || | |||| ||| || |||||||| || Sbjct 23265 GACGTTGTCGATGGTGTCTGAGCTCTCCACCTCCAAAGTGATGGTCTTTCCGGTCAGGGT 23324 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 23325 CTTGACAAAGATCTGCAT 23342 >seq1564 Length=26684 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| |||||||| || | ||| ||||||||||||||| || Sbjct 12022 GTGGACTCCTTCTGGATATTGTAGTCAGAGAGAGTGCGGCCGTCCTCGAGCTGCTTTCCA 11963 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| | ||| |||||||| ||||| || |||||||| |||||| |||| Sbjct 11962 GCGAAGATGAGTCTCTGTTGGTCGGGGGGGATTCCCTCCTTGTCTTGGATCTTAGCCTTG 11903 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||||| || |||||| || | |||| ||| |||||||| || || Sbjct 11902 ACGTTGTCGATGGTGTCGGAGGACTCCACTTCCAAAGTGATGGTCTTGCCGGTGAGGGTC 11843 Query 133644 TTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 11842 TTGACAAAGATTTGCAT 11826 >seq593 Length=28782 Score = 111 bits (122), Expect = 2e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||| |||||||| || || ||||||| | ||| |||||||||||||| |||||||| Sbjct 15495 GTCCTCAAGCTGCTTTCCGGCAAAAATGAGTCTCTGTTGGTCGGGAGGGATTCCTTCCTT 15554 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||||| ||| | | || | || || | || || || || | ||||| Sbjct 15555 GTCTTGAATCTTGGCCTTAACATTGTCGATAGTATCTGAGGATTCTACTTCTAAGGTGAT 15614 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| |||||||| |||||||| || ||||||||||| Sbjct 15615 GGTCTTGCCGGTGAGAGTTTTGACAAAAATCTGCAT 15650 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | || ||||| ||||| || |||||||||| || ||| ||| || | | Sbjct 16129 AAATGGAGAGTAGACTCCTTCTGGATGTTGTAATCGCTCAAAGTGCGGCCGTCTTCCAAC 16188 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || ||| | ||||| | ||| || ||||| ||||| ||||||||||| |||| Sbjct 16189 TGCTTTCCGGCGAAGATGAGTCTCTGTTGATCGGGTGGGATTCCTTCCTTGTCTTGGATC 16248 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | ||||| | |||||| |||| |||| || || || Sbjct 16249 TTGGCCTTTACATTATCGATTGTGTCTGAACTCTCCACTTCGAGTGTGATTGTCTTTCCA 16308 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || || ||||| || |||||| Sbjct 16309 GTTAGTGTCTTAACGAAGATTTGCATG 16335 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| |||||||| ||| | || ||| |||||| |||||||| | Sbjct 15682 GTAGACTCCTTCTGGATATTGTAGTCGGAAAGAGT--ACGTCCGTCCTCAAGCTGCTTTC 15739 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| | ||| || ||||| ||||| ||||||||||| ||||| || Sbjct 15740 CGGCAAAGATGAGTCTCTGTTGATCGGGTGGGATTCCTTCCTTGTCTTGAATCTTGGCCT 15799 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||| | ||| || |||| ||||| || || || |||| || Sbjct 15800 TCACATTATCTATAGTGTCTGAACTCTCTACTTCGAGGGTGATTGTCTTTCCTGTCAAAG 15859 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 15860 TCTTGACGAAAATCTGCAT 15878 >seq1441 Length=33442 Score = 105 bits (116), Expect = 6e-18 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 148817 CACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGAT 148876 || |||||| || || ||||||||||| || ||||||| | || ||||||| | || Sbjct 2471 CAGGGCGATGGATGCCAGATTGCACACCGCAACCTCATCCTGCGCAGTGTACTCCATAAT 2412 Query 148877 CTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTT 148936 ||||| ||||| ||||| | ||||| || | ||||| ||| |||||||| ||||| Sbjct 2411 CTCGGTGCACAAGTTGCTAGACTTGATGGTTCCGAGGTTCTGTTGGTTGCTCTTTCTGTT 2352 Query 148937 GCACGCGTCCTTGTACAGCATGTACGGT 148964 | ||||||||||| ||||| || ||| Sbjct 2351 GGCGGCGTCCTTGTAGAGCATATAAGGT 2324 >seq1378 Length=10532 Score = 102 bits (112), Expect = 8e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 |||||||||||||| || || | ||||| | ||| |||||||| || || ||||||||| Sbjct 10395 TCCTCGAGCTGCTTTCCGGCAAAGATGAGTCTCTGTTGGTCGGGGGGAATTCCTTCCTTG 10336 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||| | | || || || | ||||| | Sbjct 10335 TCTTGGATCTTGGCCTTGACGTTATCGATGGTGTCAGATGATTCGACCTCTAAGGTGATG 10276 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 || || ||||| ||||| || ||||| ||||||||| Sbjct 10275 GTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCATG 10240 >seq717 Length=13837 Score = 102 bits (112), Expect = 8e-17 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||| || || ||||| ||| | ||| | ||||| | |||||| || Sbjct 193 GGTGGACTCTTTTTGGATGTTGTAGTCGGAGAGGGTGCGCCCATCCTCTAACTGCTTTCC 252 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | | ||| || ||||||||||| ||||||||||| ||||| ||| Sbjct 253 GGCGAAGATCAATCTCTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGAATCTTGGCCTT 312 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||||| || ||| || || | || | || || || || || || Sbjct 313 GACGTTATCGATGGTGTCGGAGGACTCTACTTCCAAAGTAATAGTCTTTCCTGTGAGGGT 372 Query 133643 TTTTACGAAAATCTGCATG 133661 |||||||||||||||||| Sbjct 373 CTTTACGAAAATCTGCATG 391 Score = 82.4 bits (90), Expect = 7e-11 Identities = 114/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||| |||||||| || || | ||||| | ||| || ||||| || || |||||||| Sbjct 7 GTCCTCAAGCTGCTTTCCGGCAAAGATGAGTCTCTGTTGATCGGGGGGAATTCCTTCCTT 66 Query 133565 GTCGGTGATCTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGA 133623 ||| ||| || |||| | | | || | ||||||| || ||| || || | ||| | Sbjct 67 GTC-TTGAATCTTGGCTTTAACGTTGTCGATGGTGTCGGAGGACTCGACCTCCAGGGTAA 125 Query 133624 CGGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || |||| ||| || ||||| |||||||| Sbjct 126 TCGTCTTTCCAGTCAAAGTCTTGACGAATATCTGCAT 162 >seq2313 Length=44285 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||||||||||||||| ||||| |||| | || ||||| |||||||| || Sbjct 27613 GTGGACTCTTTCTGTATGTTGTAGTCGCTGAGGGTTCTTCCATCCTCCAGCTGCTTTCCA 27554 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| | ||| ||||| || || || || ||||| || |||||| ||| Sbjct 27553 GCGAAGATGAGTCTCTGTTGGTCTGGGGGTATTCCCTCCTTATCTTGGATCTTGGCCTTT 27494 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||| | | ||| || || | |||| ||| || ||||| | ||| Sbjct 27493 ACATTGTCGATGGTGTCTGAGCTCTCGACTTCCAAAGTGATGGTCTTTCCGGTTAAAGTC 27434 Query 133644 TTTACGAAAATCTGCATG 133661 ||||| |||||||||||| Sbjct 27433 TTTACAAAAATCTGCATG 27416 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| || || || ||||| |||| | || |||||| |||||||| || Sbjct 27841 GTGGACTCCTTTTGAATGTTGTAGTCGCTGAGGGTTCTTCCGTCCTCTAGCTGCTTTCCG 27782 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| | ||| ||||| || || |||||||||||||| |||||| |||| Sbjct 27781 GCGAAGATGAGTCTCTGTTGGTCTGGTGGAATGCCTTCCTTGTCTTGGATCTTAGCCTTG 27722 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || || | | || || |||| ||||| || || || || || || Sbjct 27721 ACGTTGTCTATTGTATCTGAAGATTCAACTTCGAGGGTGATTGTCTTTCCAGTGAGGGTC 27662 Query 133644 TTTACGAAAATCTGCAT 133660 |||||||| |||||||| Sbjct 27661 TTTACGAAGATCTGCAT 27645 >seq1766 Length=5059 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| || || |||||||| |||| | ||| | | | ||||| | ||||| || Sbjct 4740 GTAGACTCCTTTTGAATATTGTAGTCGCTAAGTGTGCGTCCA-TCCTCTAATTGCTTTCC 4798 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| | ||| || ||||| ||||| || |||||||| ||||| || Sbjct 4799 GGCGAAAATGAGTCTCTGTTGATCGGGTGGGATTCCCTCCTTGTCTTGTATCTTGGCTTT 4858 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| | | |||||| |||| ||||| || || || |||| ||| Sbjct 4859 TACATTGTCGATGGTGTCTGAGCTCTCCACTTCGAGGGTGATTGTCTTTCCAGTCAAAGT 4918 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 4919 CTTAACGAAAATCTGCAT 4936 >seq343 Length=26413 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 |||||||||||||| || || ||||||| | ||| || ||||| ||||||||||| ||| Sbjct 230 TCCTCGAGCTGCTTTCCGGCAAAAATGAGTCTCTGTTGATCGGGTGGGATGCCTTCTTTG 171 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| || | | || | ||||| | ||| || |||| ||||| Sbjct 170 TCTTGTATCTTGGCTTTTACGTTGTCGATAGTGTCTGAACTCTCTACTTCGAGGGTGATT 111 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || |||| ||| || |||||||||||||| Sbjct 110 GTCTTTCCAGTCAAAGTCTTGACGAAAATCTGCAT 76 >seq1044 Length=18651 Score = 89.7 bits (98), Expect = 5e-13 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| |||||||||||||| ||||| || | || ||| | | | || || || Sbjct 18574 AAGTGAAGGGTAGACTCTTTCTGTATGTTGTAGTCACTCAGTGTGCGTCCA-TCTTCCAG 18516 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || ||| | ||||| | ||| |||||||| ||||| || |||||||| || Sbjct 18515 TTGCTTTCCAGCGAAGATGAGTCTCTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGTAT 18456 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| || | | || | || || | ||| || || | |||| || ||||| Sbjct 18455 CTTGGCTTTTACATTATCGATGGTATCTGAACTCTCGACTTCCAATGTGATTGTCTTGCC 18396 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 ||| || || |||||||| || |||||| Sbjct 18395 GGTGAGTGTCTTTACGAAGATTTGCATG 18368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483405227807480