Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1344 100 2e-16 seq593 100 2e-16 seq1766 95.1 1e-14 seq2313 91.5 1e-13 seq2113 89.7 4e-13 seq1024 89.7 4e-13 seq1564 86.0 5e-12 seq1044 82.4 6e-11 >seq1344 Length=40060 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 |||||| || | || || || || ||||| |||||||| | |||| | || || Sbjct 23999 TACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCTGAGAGTGTGCGTCCATCCTC 24058 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 || || || |||||| | ||||| | |||||| || || || | || || ||||| Sbjct 24059 CAGTTGCTTTCCGGCGAAGATGAGTCTCTGTTGGTCGGGGGGAATTCCTTCCTTATCTTG 24118 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||||| ||| | | || | |||||||| | ||| ||||| | || || | || Sbjct 24119 GATCTTGGCTTTAACATTGTCGATAGTGTCTGAAGATTCGACTTCCAAGGTGATTGTCTT 24178 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| || |||||||| |||||||||||||| Sbjct 24179 GCCGGTGAGAGTTTTGACAAAGATTTGCAT 24208 >seq593 Length=28782 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || ||||||||||| | ||||| || || || || ||||| ||||||| |||| || Sbjct 16120 CGTAATACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAATCGCTCAAAGTGCGGCCG 16179 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | ||| || |||||| | ||||| | ||||||||| || || | || || || Sbjct 16180 TCTTCCAACTGCTTTCCGGCGAAGATGAGTCTCTGTTGATCGGGTGGGATTCCTTCCTTG 16239 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| || | | || | ||||||| || ||||| || || || Sbjct 16240 TCTTGGATCTTGGCCTTTACATTATCGATTGTGTCTGAACTCTCCACTTCGAGTGTGATT 16299 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || || || || ||||||||||| Sbjct 16300 GTCTTTCCAGTTAGTGTCTTAACGAAGATTTGCAT 16334 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC-TCATGTTGCGCTC 27091 || || || ||||| | || || || || || || |||||||||| | | ||| || | Sbjct 15892 CGTAAGACTAAATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGCTTAAAGTTCTGC-C 15950 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 ||| || | || || |||||| ||||||| | ||| ||||| || || | |||||||| Sbjct 15951 GTCCTCTAATTGCTTTCCGGCGAAAATGAGTCTCTGCTGATCGGGTGGGATTCCCTCTTT 16010 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 || ||||||| ||| | | || | || |||| | || ||||||| || || Sbjct 16011 GTCTTGGATCTTGGCTTTGACATTGTCGATGGTATCTGAAGACTCGACTTCTAAGGTAAT 16070 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| || |||||||| || || |||||||| Sbjct 16071 TGTCTTGCCAGTGAGAGTTTTGACGAAAATTTGCAT 16106 >seq1766 Length=5059 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || || || || | ||||| || |||||||||||||||||||| | |||| | Sbjct 4722 CGTAAAACTAAGTGGAGAGTAGACTCCTTTTGAATATTGTAGTCGCTAAGTGTGCGTCCA 4781 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || | || || |||||| ||||||| | ||||||||| || || | ||||| || Sbjct 4782 TCCTCTAATTGCTTTCCGGCGAAAATGAGTCTCTGTTGATCGGGTGGGATTCCCTCCTTG 4841 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| ||| | | || | ||||||| | || ||||| || || || Sbjct 4842 TCTTGTATCTTGGCTTTTACATTGTCGATGGTGTCTGAGCTCTCCACTTCGAGGGTGATT 4901 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || |||| ||| || || || || ||||| Sbjct 4902 GTCTTTCCAGTCAAAGTCTTAACGAAAATCTGCAT 4936 >seq2313 Length=44285 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || |||||||| ||||||||||| | | | | |||| || ||||| || || Sbjct 27842 CGTGGACTCCTTTTGAATGTTGTAGTCGCTGAGGGTTCTTCCGTCCTCTAGCTGCTTTCC 27783 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 |||| | ||||| | |||||| || || || | || || || || |||||| || Sbjct 27782 GGCGAAGATGAGTCTCTGTTGGTCTGGTGGAATGCCTTCCTTGTCTTGGATCTTAGCCTT 27723 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | | |||| || |||| | ||||||||| || || || | || || || || || Sbjct 27722 GACGTTGTCTATTGTATCTGAAGATTCAACTTCGAGGGTGATTGTCTTTCCAGTGAGGGT 27663 Query 27230 TTTCACAAAGATTTGCAT 27247 || || ||||| ||||| Sbjct 27662 CTTTACGAAGATCTGCAT 27645 >seq2113 Length=21246 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || |||||||||||||| | | | |||| || ||||| || ||| Sbjct 20890 GTGGACTCCTTCTGGATATTGTAGTCGCTGAGAGTTCTACCGTCCTCAAGCTGCTTTCCG 20831 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| ||||||| | |||||| || || || | ||||| ||||| |||||| ||| Sbjct 20830 GCGAAAATGAGTCTCTGTTGGTCGGGGGGGATTCCCTCCTTATCTTGAATCTTGGCCTTC 20771 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | || || || || || || || | || || |||| ||| Sbjct 20770 ACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTC 20711 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| || |||||||| Sbjct 20710 TTCACGAAAATTTGCAT 20694 >seq1024 Length=14032 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCAT-GTTGCGCTC 27091 || |||||||| || | || || || || || || || |||||||||| ||| || | Sbjct 13995 CGTAATACCAAGTGGAGAGTCGATTCCTTCTGGATGTTATAGTCGCTCAAAGTTCTGC-C 13937 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 |||||| | ||| || |||||| | ||||| | |||||| || || || | |||||||| Sbjct 13936 GTCTTCCAACTGCTTTCCGGCGAAGATGAGTCTCTGTTGGTCGGGTGGGATTCCCTCTTT 13877 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 || ||||||| ||| | | || | || |||| | || || || || || || Sbjct 13876 GTCTTGGATCTTGGCTTTGACATTGTCGATGGTATCTGAAGACTCGACCTCAAGTGTAAT 13817 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || || || || ||||||||||| Sbjct 13816 TGTCTTTCCTGTGAGTGTCTTTACGAAGATTTGCAT 13781 >seq1564 Length=26684 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || ||||||||||| | |||| |||| |||||||| || || Sbjct 12022 GTGGACTCCTTCTGGATATTGTAGTCAGAGAGAGTGCGGCCGTCCTCGAGCTGCTTTCCA 11963 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||| | |||||| || || || | ||||| || || |||||| || Sbjct 11962 GCGAAGATGAGTCTCTGTTGGTCGGGGGGGATTCCCTCCTTGTCTTGGATCTTAGCCTTG 11903 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | || || ||||| | ||| || | ||||| || || || Sbjct 11902 ACGTTGTCGATGGTGTCGGAGGACTCCACTTCCAAAGTGATGGTCTTGCCGGTGAGGGTC 11843 Query 27231 TTCACAAAGATTTGCAT 27247 || |||||||||||||| Sbjct 11842 TTGACAAAGATTTGCAT 11826 >seq1044 Length=18651 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 |||||| || | ||||| ||||| || || |||||||| |||| |||| | ||||| Sbjct 18578 TACCAAGTGAAGGGTAGACTCTTTCTGTATGTTGTAGTCACTCAGTGTGCGTCCATCTTC 18519 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 || || || || ||| | ||||| | |||||| || || || | ||||| || || Sbjct 18518 CAGTTGCTTTCCAGCGAAGATGAGTCTCTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTG 18459 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| ||| | | || | || |||| || ||||| | || || | || Sbjct 18458 TATCTTGGCTTTTACATTATCGATGGTATCTGAACTCTCGACTTCCAATGTGATTGTCTT 18399 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| || || || || || ||||||||||| Sbjct 18398 GCCGGTGAGTGTCTTTACGAAGATTTGCAT 18369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424921054005624