Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq2030 86.0 6e-12 seq637 86.0 6e-12 >seq2030 Length=13636 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 34575 TGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGT 34634 ||||||| || || || || |||| | || ||||| || || || ||||| ||| | | Sbjct 12418 TGATGGCCCTTCCTCCTTGTCACATGTTTTGTCAATTTTATGTGGCCAATGGCGAGTTAT 12477 Query 34635 CCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTA 34694 | |||||| | || || |||| | |||||||| ||||| || || ||||||||||| Sbjct 12478 CTTGCCAGATGTACCAGAGATCAGCCGACATGGGATTAGGTGTTCCCTTCAACATTGCCT 12537 Query 34695 GTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 |||||| || | || |||||||| || ||| Sbjct 12538 CTTACGCCCTTTTAACTGTGATGATCGCCCAAGTC 12572 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 ||| || |||||||| || | || |||||| ||||||||||| || || ||||| Sbjct 12572 GACTTGGGCGATCATCACAGTTAAAAGGGCGTAAGAGGCAATGTTGAAGGGAACACCTAA 12513 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 |||||||| | |||| || || | |||||| || | ||| ||||| || || || || Sbjct 12512 TCCCATGTCGGCTGATCTCTGGTACATCTGGCAAGATAACTCGCCATTGGCCACATAAAA 12453 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCA 6770 ||| || | |||| || || || || ||||||| Sbjct 12452 TTGACAAAACATGTGACAAGGAGGAAGGGCCATCA 12418 >seq637 Length=38019 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 34575 TGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGT 34634 ||||||| || || || || |||| | || ||||| || || || ||||| ||| | | Sbjct 11307 TGATGGCCCTTCCTCCTTGTCACATGTTTTGTCAATTTTATGTGGCCAATGGCGAGTTAT 11366 Query 34635 CCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTA 34694 | |||||| | || || |||| | |||||||| ||||| || || ||||||||||| Sbjct 11367 CTTGCCAGATGTACCAGAGATCAGCCGACATGGGATTAGGTGTTCCCTTCAACATTGCCT 11426 Query 34695 GTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 |||||| || | || |||||||| || ||| Sbjct 11427 CTTACGCCCTTTTAACTGTGATGATCGCCCAAGTC 11461 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 ||| || |||||||| || | || |||||| ||||||||||| || || ||||| Sbjct 11461 GACTTGGGCGATCATCACAGTTAAAAGGGCGTAAGAGGCAATGTTGAAGGGAACACCTAA 11402 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 |||||||| | |||| || || | |||||| || | ||| ||||| || || || || Sbjct 11401 TCCCATGTCGGCTGATCTCTGGTACATCTGGCAAGATAACTCGCCATTGGCCACATAAAA 11342 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCA 6770 ||| || | |||| || || || || ||||||| Sbjct 11341 TTGACAAAACATGTGACAAGGAGGAAGGGCCATCA 11307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448247960347440