Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protostelium_20mycophagum_20[genbank_20GCA_5F002081555.1_202017-04- 06] 2,577 sequences; 39,717,957 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq2030 84.2 2e-11 seq637 84.2 2e-11 >seq2030 Length=13636 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/133 (74%), Gaps = 6/133 (5%) Strand=Plus/Minus Query 29758 GGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGA 29817 ||| ||||| ||||| || || | |||||||| |||| |||||||| | |||||| || Sbjct 12536 GGCAATGTTGAAGGGAACACCTAATCCCATGTCGGCTGATCTCTGGTACATCTGGCAAGA 12477 Query 29818 GAGCTCTCCGTCGCTCACGTAAAACTGACA---CATGGCATGGCACGGAGGAAGGGCCAT 29874 | ||| || | | ||| ||||| ||||| |||| || || |||||||||||||| Sbjct 12476 TAACTCGCCATTGGCCACATAAAATTGACAAAACATG---TGACAAGGAGGAAGGGCCAT 12420 Query 29875 GAGACCCAAGTCT 29887 | ||| | |||| Sbjct 12419 CAAACCGAGGTCT 12407 >seq637 Length=38019 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/133 (74%), Gaps = 6/133 (5%) Strand=Plus/Minus Query 29758 GGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGA 29817 ||| ||||| ||||| || || | |||||||| |||| |||||||| | |||||| || Sbjct 11425 GGCAATGTTGAAGGGAACACCTAATCCCATGTCGGCTGATCTCTGGTACATCTGGCAAGA 11366 Query 29818 GAGCTCTCCGTCGCTCACGTAAAACTGACA---CATGGCATGGCACGGAGGAAGGGCCAT 29874 | ||| || | | ||| ||||| ||||| |||| || || |||||||||||||| Sbjct 11365 TAACTCGCCATTGGCCACATAAAATTGACAAAACATG---TGACAAGGAGGAAGGGCCAT 11309 Query 29875 GAGACCCAAGTCT 29887 | ||| | |||| Sbjct 11308 CAAACCGAGGTCT 11296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406150443556222