Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq13981 127 2e-24 seq15072 116 4e-21 seq16268 105 8e-18 >seq13981 Length=1966 Score = 127 bits (140), Expect = 2e-24 Identities = 383/587 (65%), Gaps = 16/587 (3%) Strand=Plus/Plus Query 145689 CTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTC 145748 ||||||||| ||| ||||||||| |||||||| ||| ||| | | ||||| |||| Sbjct 201 CTCCACGTGATTGCTGTAGACGTGGGCGTCCCCGAGGGTGTGTACCAGCTCCCCTGGCTT 260 Query 145749 GAGGCCCGTGAGGTGGGCGACCATGTAG-GTCAGCAGGGAGTAGCTGGCTATGTTGAAGG 145807 | || ||| | ||| | || ||| |||||||||| ||||||||| ||||| || | Sbjct 261 CAACCCAGTGCTCTTGGCAATCA-GTATCGTCAGCAGGGCGTAGCTGGCAATGTTAAACG 319 Query 145808 GCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCG 145867 | |||||||||||||| || | || || || ||| |||||| |||| || || | Sbjct 320 GTACCCCCAGCCCCATATCGCAGCTCCGTTGATAGAGCATGCAGGACAGCT-CCTGCGTG 378 Query 145868 -------CCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGG 145920 ||||||||| || || || ||||| || || |||||||| | |||| Sbjct 379 TTGGTGTTCACGTAGAATTGAGCCAACAGATGGCATGGTGGGAGGGCCATCTCATGCAGC 438 Query 145921 TCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGA---TC 145977 | | |||||||| || || | | | | ||| | |||||| |||||| | Sbjct 439 GCGGAGGGGTTCCACGCCGTAAACAGCAATCGTCTGTCGTTGGGGTTTGTCTTGAGGGTT 498 Query 145978 TCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCC 146037 ||| | || | | | | || || || |||| || ||| | | |||| || Sbjct 499 TCCACAAT---TTGCTTTATTTGATCGACCCCCTTTCCGTCGTAGTTTTCCTTGAAGGAG 555 Query 146038 ACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGC 146097 |||| || || ||||| | |||||| |||||||| || || || |||||| | Sbjct 556 GTGTACTTTGCACCAAAGTGTCGCCACTGAAACCCGTACACCGGGCCAAGGTCCATCTCC 615 Query 146098 TCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATC 146157 || |||| || ||| | | ||||||| ||| || ||| ||||||| || Sbjct 616 TCGTAGTGCGTGAGACCGCGGCTGTCGAGGAAACTTCGGCTGCCATTGTCGTCCCAAATA 675 Query 146158 TTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGC 146217 | | | || | || || |||| || ||| |||| | ||||| | ||| Sbjct 676 TGAATGTCCTTGTCGCTCAGTAATTTGGCGTTCGTTTCGCCCCGAAGAAACCAAATGAGC 735 Query 146218 TCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 || ||| ||| || | |||||| || | ||||||||||| ||| || Sbjct 736 TCCTCGCTGACACCGCGCCAGAACACTCGCTTGGTGGTCAACAGCGG 782 >seq15072 Length=876 Score = 116 bits (128), Expect = 4e-21 Identities = 211/304 (69%), Gaps = 16/304 (5%) Strand=Plus/Minus Query 145648 GGAAAGGGCCGGGG---GCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGG 145704 ||||||| ||| || || ||| |||||| || || | ||||||||| ||| | Sbjct 477 GGAAAGGCCCGCGGCACGCGCCT---CAGCTGCTCCTGGAGCGCCTCCACGTGATTGCTG 421 Query 145705 TAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGG 145764 |||||||| |||||||| ||| ||| | | ||||| |||| | || ||| | | Sbjct 420 TAGACGTGGGCGTCCCCGAGGGTGTGTACCAGCTCCCCTGGCTTCAACCCAGTGCTCTTG 361 Query 145765 GCGACCATGTAG-GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCAT 145823 || | || ||| |||||||||| ||||||||| ||||| || || |||||||||||||| Sbjct 360 GCAATCA-GTATCGTCAGCAGGGCGTAGCTGGCAATGTTAAACGGTACCCCCAGCCCCAT 302 Query 145824 GTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCG-------CCACGTAGA 145876 || | || || || ||| |||||| |||| || || | |||||||| Sbjct 301 ATCGCAGCTCCGTTGATAGAGCATGCAGGACAGCT-CCTGCGTGTTGGTGTTCACGTAGA 243 Query 145877 ACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGG 145936 | || ||| || ||||| || || |||||||| | |||| | | |||||||| | Sbjct 242 ATTGAGCCAGCAGATGGCATGGTGGGAGGGCCATCTCATGCAGCGCGGAGGGGTTCCACG 183 Query 145937 CGGT 145940 | || Sbjct 182 CCGT 179 >seq16268 Length=2759 Score = 105 bits (116), Expect = 8e-18 Identities = 156/217 (72%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 145648 GGAAAGGGCCGGGG---GCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGG 145704 ||||||| ||| || || ||| |||||| || || | ||||||||| ||| | Sbjct 510 GGAAAGGCCCGCGGCACGCGCCT---CAGCTGCTCCTGGAGCGCCTCCACGTGATTGCTG 454 Query 145705 TAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGG 145764 |||||||| |||||||| ||| ||| | | ||||| |||| | || ||| | | Sbjct 453 TAGACGTGGGCGTCCCCGAGGGTGTGTACCAGCTCCCCTGGCTTCAACCCAGTGCTCTTG 394 Query 145765 GCGACCATGTAG-GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCAT 145823 || | || ||| |||||||||| ||||||||| ||||| || || |||||||||||||| Sbjct 393 GCAATCA-GTATCGTCAGCAGGGCGTAGCTGGCAATGTTAAACGGTACCCCCAGCCCCAT 335 Query 145824 GTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCC 145860 || | || || || ||| |||||| |||||| Sbjct 334 ATCGCAGCTCCGTTGATAGAGCATGCAGGACAGCTCC 298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589948908229560