Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq15380 91.5 2e-13 seq10209 91.5 2e-13 seq6928 91.5 2e-13 seq16698 87.8 2e-12 seq15817 87.8 2e-12 seq14616 87.8 2e-12 seq14479 87.8 2e-12 seq14382 87.8 2e-12 seq11483 87.8 2e-12 seq10572 87.8 2e-12 seq10016 87.8 2e-12 seq9418 87.8 2e-12 seq7870 87.8 2e-12 >seq15380 Length=3290 Score = 91.5 bits (100), Expect = 2e-13 Identities = 184/273 (67%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 63239 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63298 ||||| || ||||| ||| || ||||| || || ||||| |||||||||||||||||||| Sbjct 1029 CATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAG 970 Query 63299 AGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63358 || ||| ||||| | | | || ||||| || || || || || || || Sbjct 969 GGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCAGGCGGAC 910 Query 63359 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63418 |||| | | | || | |||||||| || | ||| | ||| | | || || || Sbjct 909 GAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTT 850 Query 63419 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63478 || ||||| || | ||| | ||||||||||| | || | | ||| || | | Sbjct 849 ACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAG 790 Query 63479 ACCGTTTGATATACCATTGGTACCGGAGATATA 63511 |||||| || |||| || ||||||| ||| || Sbjct 789 ACCGTTGGAGGTACCGTTCGTACCGGCGATGTA 757 >seq10209 Length=2565 Score = 91.5 bits (100), Expect = 2e-13 Identities = 184/273 (67%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 63239 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63298 ||||| || ||||| ||| || ||||| || || ||||| |||||||||||||||||||| Sbjct 1202 CATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAG 1143 Query 63299 AGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63358 || ||| ||||| | | | || ||||| || || || || || || || Sbjct 1142 GGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCAGGCGGAC 1083 Query 63359 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63418 |||| | | | || | |||||||| || | ||| | ||| | | || || || Sbjct 1082 GAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTT 1023 Query 63419 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63478 || ||||| || | ||| | ||||||||||| | || | | ||| || | | Sbjct 1022 ACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAG 963 Query 63479 ACCGTTTGATATACCATTGGTACCGGAGATATA 63511 |||||| || |||| || ||||||| ||| || Sbjct 962 ACCGTTGGAGGTACCGTTCGTACCGGCGATGTA 930 >seq6928 Length=4025 Score = 91.5 bits (100), Expect = 2e-13 Identities = 184/273 (67%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 63239 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63298 ||||| || ||||| ||| || ||||| || || ||||| |||||||||||||||||||| Sbjct 2159 CATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAG 2218 Query 63299 AGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63358 || ||| ||||| | | | || ||||| || || || || || || || Sbjct 2219 GGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCAGGCGGAC 2278 Query 63359 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63418 |||| | | | || | |||||||| || | ||| | ||| | | || || || Sbjct 2279 GAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTT 2338 Query 63419 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63478 || ||||| || | ||| | ||||||||||| | || | | ||| || | | Sbjct 2339 ACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAG 2398 Query 63479 ACCGTTTGATATACCATTGGTACCGGAGATATA 63511 |||||| || |||| || ||||||| ||| || Sbjct 2399 ACCGTTGGAGGTACCGTTCGTACCGGCGATGTA 2431 >seq16698 Length=1832 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 ||||||||||||||| | ||| | |||||| ||||| || |||||||| | || Sbjct 1583 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 1524 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 ||||| || ||||| || |||| ||| || ||||| |||||||| || || || || Sbjct 1523 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 1464 Query 33716 AGCAAAGGCAATAAGTCTCTC 33736 |||||| |||| || | ||| Sbjct 1463 AGCAAAACCAATCAGGCGCTC 1443 >seq15817 Length=2130 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 ||||||||||||||| | ||| | |||||| ||||| || |||||||| | || Sbjct 783 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 842 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 ||||| || ||||| || |||| ||| || ||||| |||||||| || || || || Sbjct 843 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 902 Query 33716 AGCAAAGGCAATAAGTCTCTC 33736 |||||| |||| || | ||| Sbjct 903 AGCAAAACCAATCAGGCGCTC 923 >seq14616 Length=2520 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 ||||||||||||||| | ||| | |||||| ||||| || |||||||| | || Sbjct 782 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 841 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 ||||| || ||||| || |||| ||| || ||||| |||||||| || || || || Sbjct 842 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 901 Query 33716 AGCAAAGGCAATAAGTCTCTC 33736 |||||| |||| || | ||| Sbjct 902 AGCAAAACCAATCAGGCGCTC 922 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 ||||||||||||||| | ||| | |||||| ||||| || |||||||| | || Sbjct 2272 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 2331 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 ||||| || ||||| || |||| ||| || ||||| |||||||| || || || || Sbjct 2332 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 2391 Query 33716 AGCAAA 33721 |||||| Sbjct 2392 AGCAAA 2397 >seq14479 Length=1290 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 ||||||||||||||| | ||| | |||||| ||||| || |||||||| | || Sbjct 816 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 757 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 ||||| || ||||| || |||| ||| || ||||| |||||||| || || || || Sbjct 756 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 697 Query 33716 AGCAAAGGCAATAAGTCTCTC 33736 |||||| |||| || | ||| Sbjct 696 AGCAAAACCAATCAGGCGCTC 676 >seq14382 Length=1200 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 ||||||||||||||| | ||| | |||||| ||||| || |||||||| | || Sbjct 371 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 430 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 ||||| || ||||| || |||| ||| || ||||| |||||||| || || || || Sbjct 431 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 490 Query 33716 AGCAAAGGCAATAAGTCTCTC 33736 |||||| |||| || | ||| Sbjct 491 AGCAAAACCAATCAGGCGCTC 511 >seq11483 Length=3389 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 ||||||||||||||| | ||| | |||||| ||||| || |||||||| | || Sbjct 1574 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 1515 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 ||||| || ||||| || |||| ||| || ||||| |||||||| || || || || Sbjct 1514 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 1455 Query 33716 AGCAAAGGCAATAAGTCTCTC 33736 |||||| |||| || | ||| Sbjct 1454 AGCAAAACCAATCAGGCGCTC 1434 >seq10572 Length=1138 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 ||||||||||||||| | ||| | |||||| ||||| || |||||||| | || Sbjct 383 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 442 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 ||||| || ||||| || |||| ||| || ||||| |||||||| || || || || Sbjct 443 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 502 Query 33716 AGCAAAGGCAATAAGTCTCTC 33736 |||||| |||| || | ||| Sbjct 503 AGCAAAACCAATCAGGCGCTC 523 >seq10016 Length=1858 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 ||||||||||||||| | ||| | |||||| ||||| || |||||||| | || Sbjct 1199 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 1140 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 ||||| || ||||| || |||| ||| || ||||| |||||||| || || || || Sbjct 1139 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 1080 Query 33716 AGCAAAGGCAATAAGTCTCTC 33736 |||||| |||| || | ||| Sbjct 1079 AGCAAAACCAATCAGGCGCTC 1059 >seq9418 Length=1914 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 ||||||||||||||| | ||| | |||||| ||||| || |||||||| | || Sbjct 1108 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 1049 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 ||||| || ||||| || |||| ||| || ||||| |||||||| || || || || Sbjct 1048 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 989 Query 33716 AGCAAAGGCAATAAGTCTCTC 33736 |||||| |||| || | ||| Sbjct 988 AGCAAAACCAATCAGGCGCTC 968 >seq7870 Length=1622 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 ||||||||||||||| | ||| | |||||| ||||| || |||||||| | || Sbjct 736 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 795 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 ||||| || ||||| || |||| ||| || ||||| |||||||| || || || || Sbjct 796 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 855 Query 33716 AGCAAAGGCAATAAGTCTCTC 33736 |||||| |||| || | ||| Sbjct 856 AGCAAAACCAATCAGGCGCTC 876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629681094907920