Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq15380 104 2e-17 seq10209 104 2e-17 seq6928 104 2e-17 seq15740 87.8 2e-12 seq7780 87.8 2e-12 seq6241 87.8 2e-12 >seq15380 Length=3290 Score = 104 bits (114), Expect = 2e-17 Identities = 311/476 (65%), Gaps = 17/476 (4%) Strand=Plus/Minus Query 153919 CGTTGGGACACATCAGTGACCATCGGCCATTTTCTTGAACGCGACGCATAAATATATCGG 153978 ||||||| |||||| | ||| | || | || | || || ||| || | ||| | Sbjct 1039 CGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAG 980 Query 153979 GAACCCATAGGGCGTTCATCAGGTCGCGCGCTTTCGT--GTCTTCGCTGCCAATGTTTCG 154036 ||| ||| ||||||| | ||| ||||| || ||| ||| || | || ||||||| Sbjct 979 GAATCCAAAGGGCGTAAAACAGATCGCGGGCA--CGTTGGTCCTCCTTACCGGTGTTTCG 922 Query 154037 ACGCATGTGTAAGACGTCCATTATGTCGCAATGCCACGGTTCCACGTAAACTGCTTGAGC 154096 || | | | || || | | |||| |||||||| || | ||| || || || Sbjct 921 CTTCAGGCGGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGC 862 Query 154097 GCCTTTACGCTTGCCGCC---CTGATTTACGTGACGCACCATATTGTTGAAAACCCGAAG 154153 || |||||||| ||||| ||| | |||| || | | || ||||| || || || Sbjct 861 ACCCTTACGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAG 802 Query 154154 CATGGGTAGCAGACCGCTGGCGGTACCGTTTGTA-----GATTTAATCTTGCTGTTGCGG 154208 |||||| | |||||| ||| ||||||||| ||| ||| ||| || | | | | Sbjct 801 CATGGGCACGAGACCGTTGGAGGTACCGTTCGTACCGGCGATGTAA-CTACCGGAAGAG- 744 Query 154209 CCTCGAACGCTGTTTACGTTTAATCCAATACCGCCGCCGTGTTTGGAGATCATGGCGCAA 154268 || | | ||| |||| || |||||||| ||| | || ||| ||||||| Sbjct 743 ---CGGATGTTGTGAACGTGGAACCCAATACCACCGGCCGCCTTACTGATGGTGGCGCAC 687 Query 154269 TCGTTCAATGTGTTATAGATACCACGAATGCTATCGCTTTCCATGGTCAATAGGAAACAT 154328 || || | |||| || || ||| || || ||| | ||||| || ||||| || Sbjct 686 TCCTTGAGGGTGTCGTAAATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAG 627 Query 154329 GAACTCATCTGCGGAGTTGGAGTGCCGGCAGCAAACATGGTCGGGCTTGCGTGCGT 154384 ||||||||||| || | || || ||||| |||| ||| ||| | ||||| || Sbjct 626 GAACTCATCTGAGGCTTCGGGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGT 571 >seq10209 Length=2565 Score = 104 bits (114), Expect = 2e-17 Identities = 311/476 (65%), Gaps = 17/476 (4%) Strand=Plus/Minus Query 153919 CGTTGGGACACATCAGTGACCATCGGCCATTTTCTTGAACGCGACGCATAAATATATCGG 153978 ||||||| |||||| | ||| | || | || | || || ||| || | ||| | Sbjct 1212 CGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAG 1153 Query 153979 GAACCCATAGGGCGTTCATCAGGTCGCGCGCTTTCGT--GTCTTCGCTGCCAATGTTTCG 154036 ||| ||| ||||||| | ||| ||||| || ||| ||| || | || ||||||| Sbjct 1152 GAATCCAAAGGGCGTAAAACAGATCGCGGGCA--CGTTGGTCCTCCTTACCGGTGTTTCG 1095 Query 154037 ACGCATGTGTAAGACGTCCATTATGTCGCAATGCCACGGTTCCACGTAAACTGCTTGAGC 154096 || | | | || || | | |||| |||||||| || | ||| || || || Sbjct 1094 CTTCAGGCGGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGC 1035 Query 154097 GCCTTTACGCTTGCCGCC---CTGATTTACGTGACGCACCATATTGTTGAAAACCCGAAG 154153 || |||||||| ||||| ||| | |||| || | | || ||||| || || || Sbjct 1034 ACCCTTACGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAG 975 Query 154154 CATGGGTAGCAGACCGCTGGCGGTACCGTTTGTA-----GATTTAATCTTGCTGTTGCGG 154208 |||||| | |||||| ||| ||||||||| ||| ||| ||| || | | | | Sbjct 974 CATGGGCACGAGACCGTTGGAGGTACCGTTCGTACCGGCGATGTAA-CTACCGGAAGAG- 917 Query 154209 CCTCGAACGCTGTTTACGTTTAATCCAATACCGCCGCCGTGTTTGGAGATCATGGCGCAA 154268 || | | ||| |||| || |||||||| ||| | || ||| ||||||| Sbjct 916 ---CGGATGTTGTGAACGTGGAACCCAATACCACCGGCCGCCTTACTGATGGTGGCGCAC 860 Query 154269 TCGTTCAATGTGTTATAGATACCACGAATGCTATCGCTTTCCATGGTCAATAGGAAACAT 154328 || || | |||| || || ||| || || ||| | ||||| || ||||| || Sbjct 859 TCCTTGAGGGTGTCGTAAATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAG 800 Query 154329 GAACTCATCTGCGGAGTTGGAGTGCCGGCAGCAAACATGGTCGGGCTTGCGTGCGT 154384 ||||||||||| || | || || ||||| |||| ||| ||| | ||||| || Sbjct 799 GAACTCATCTGAGGCTTCGGGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGT 744 >seq6928 Length=4025 Score = 104 bits (114), Expect = 2e-17 Identities = 311/476 (65%), Gaps = 17/476 (4%) Strand=Plus/Plus Query 153919 CGTTGGGACACATCAGTGACCATCGGCCATTTTCTTGAACGCGACGCATAAATATATCGG 153978 ||||||| |||||| | ||| | || | || | || || ||| || | ||| | Sbjct 2149 CGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAG 2208 Query 153979 GAACCCATAGGGCGTTCATCAGGTCGCGCGCTTTCGT--GTCTTCGCTGCCAATGTTTCG 154036 ||| ||| ||||||| | ||| ||||| || ||| ||| || | || ||||||| Sbjct 2209 GAATCCAAAGGGCGTAAAACAGATCGCGGGCA--CGTTGGTCCTCCTTACCGGTGTTTCG 2266 Query 154037 ACGCATGTGTAAGACGTCCATTATGTCGCAATGCCACGGTTCCACGTAAACTGCTTGAGC 154096 || | | | || || | | |||| |||||||| || | ||| || || || Sbjct 2267 CTTCAGGCGGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGC 2326 Query 154097 GCCTTTACGCTTGCCGCC---CTGATTTACGTGACGCACCATATTGTTGAAAACCCGAAG 154153 || |||||||| ||||| ||| | |||| || | | || ||||| || || || Sbjct 2327 ACCCTTACGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAG 2386 Query 154154 CATGGGTAGCAGACCGCTGGCGGTACCGTTTGTA-----GATTTAATCTTGCTGTTGCGG 154208 |||||| | |||||| ||| ||||||||| ||| ||| ||| || | | | | Sbjct 2387 CATGGGCACGAGACCGTTGGAGGTACCGTTCGTACCGGCGATGTAA-CTACCGGAAGAG- 2444 Query 154209 CCTCGAACGCTGTTTACGTTTAATCCAATACCGCCGCCGTGTTTGGAGATCATGGCGCAA 154268 || | | ||| |||| || |||||||| ||| | || ||| ||||||| Sbjct 2445 ---CGGATGTTGTGAACGTGGAACCCAATACCACCGGCCGCCTTACTGATGGTGGCGCAC 2501 Query 154269 TCGTTCAATGTGTTATAGATACCACGAATGCTATCGCTTTCCATGGTCAATAGGAAACAT 154328 || || | |||| || || ||| || || ||| | ||||| || ||||| || Sbjct 2502 TCCTTGAGGGTGTCGTAAATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAG 2561 Query 154329 GAACTCATCTGCGGAGTTGGAGTGCCGGCAGCAAACATGGTCGGGCTTGCGTGCGT 154384 ||||||||||| || | || || ||||| |||| ||| ||| | ||||| || Sbjct 2562 GAACTCATCTGAGGCTTCGGGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGT 2617 >seq15740 Length=2267 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | || | || | ||| | ||| ||||| || || ||||| || || Sbjct 1836 CCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 1895 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || || ||||| || ||||| | || || || ||||| || ||||| Sbjct 1896 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGA 1955 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || | | || | |||||| | | ||||||| Sbjct 1956 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 2015 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | |||||||||||||| ||| || ||||| || |||||| Sbjct 2016 TCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATA 2063 >seq7780 Length=1467 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | || | || | ||| | ||| ||||| || || ||||| || || Sbjct 368 CCGCCGCGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 309 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || || ||||| || ||||| | || || || ||||| || ||||| Sbjct 308 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGA 249 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || | | || | |||||| | | ||||||| Sbjct 248 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 189 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | |||||||||||||| ||| || ||||| || |||||| Sbjct 188 TCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATA 141 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | || | || | ||| | ||| ||||| || || ||||| || || Sbjct 825 CCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 766 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || || ||||| || ||||| | || || || ||||| || ||||| Sbjct 765 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGA 706 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || | | || | |||||| | | ||||||| Sbjct 705 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 646 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | |||||||||||||| ||| || ||||| || |||||| Sbjct 645 TCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATA 598 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | || | || | ||| | ||| ||||| || || ||||| || || Sbjct 597 CCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 538 Query 139598 ATTGTGCTCGAG-TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| | || || ||||| || ||||| | || || || ||||| || ||||| Sbjct 537 AGCGTGCCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGG 478 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || | | || | |||||| | | |||||| Sbjct 477 AATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCAC 418 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | || | |||||||||||||| ||| || ||||| || |||||| Sbjct 417 CTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATA 369 >seq6241 Length=2159 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | || | || | ||| | ||| ||||| || || ||||| || || Sbjct 1678 CCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 1737 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || || ||||| || ||||| | || || || ||||| || ||||| Sbjct 1738 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGA 1797 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || | | || | |||||| | | ||||||| Sbjct 1798 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 1857 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | |||||||||||||| ||| || ||||| || |||||| Sbjct 1858 TCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATA 1905 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | || | || | ||| | ||| ||||| || || ||||| || || Sbjct 1906 CCGCCGCGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 1965 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || || ||||| || ||||| | || ||||| ||||| || ||||| Sbjct 1966 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGA 2025 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || | | || | |||||| | | ||||||| Sbjct 2026 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 2085 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATAT-TTGCATA 139765 || | || | |||||||||||||| ||| || ||||| || | ||||| Sbjct 2086 TCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTAGCATA 2134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495956484328800