Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_006273.2 Length=235646 Score E Sequences producing significant alignments: (Bits) Value seq17017 89.7 8e-13 >seq17017 Length=3011 Score = 89.7 bits (98), Expect = 8e-13 Identities = 98/128 (77%), Gaps = 2/128 (2%) Strand=Plus/Plus Query 79711 CCAGCAGGGTGGAGTAGCAGAGGTTGTGAGCCATGATGATGGAAGGGTAGAGGCTGGCAA 79770 ||| |||||| |||||||| | ||||||||| || || ||||||||||| || ||||| Sbjct 1501 CCAACAGGGTAGAGTAGCACAAGTTGTGAGCGATAATAATGGAAGGGTAAAGAGAGGCAA 1560 Query 79771 AGTCGAACACGGCCACGGGGTCGTTGTAGTAACCCAC-CTCGGGCTCAAACACCGTGGCG 79829 | |||| ||||| ||| |||||| ||||| | ||| ||||||| ||| || ||| Sbjct 1561 AATCGAGGGTTGCCACCGGGCAGTTGTA-AAACCCTCTCTCCGGCTCAATCACGGTAGCG 1619 Query 79830 CCCTGGTA 79837 || | ||| Sbjct 1620 CCTTCGTA 1627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 753775793102640