Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq15380 98.7 1e-15 seq10209 98.7 1e-15 seq6928 98.7 1e-15 seq16698 84.2 3e-11 seq15817 84.2 3e-11 seq14616 84.2 3e-11 seq14479 84.2 3e-11 seq14382 84.2 3e-11 seq11483 84.2 3e-11 seq10572 84.2 3e-11 seq10016 84.2 3e-11 seq9418 84.2 3e-11 seq7870 84.2 3e-11 >seq15380 Length=3290 Score = 98.7 bits (108), Expect = 1e-15 Identities = 189/279 (68%), Gaps = 0/279 (0%) Strand=Plus/Minus Query 63188 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63247 ||||| || ||||| ||| || ||||| || || ||||| |||||||||||||||||||| Sbjct 1029 CATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAG 970 Query 63248 AGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63307 || ||| ||||| | || | || ||||| || || || || || || || Sbjct 969 GGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCAGGCGGAC 910 Query 63308 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63367 |||| | | | || | |||||||| || | ||| | ||| | | || || || Sbjct 909 GAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTT 850 Query 63368 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63427 || ||||| || | ||| | ||||||||||| | || | | ||| || | | Sbjct 849 ACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAG 790 Query 63428 ACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCC 63466 |||||| || |||| || ||||||| ||| || || || Sbjct 789 ACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACC 751 >seq10209 Length=2565 Score = 98.7 bits (108), Expect = 1e-15 Identities = 189/279 (68%), Gaps = 0/279 (0%) Strand=Plus/Minus Query 63188 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63247 ||||| || ||||| ||| || ||||| || || ||||| |||||||||||||||||||| Sbjct 1202 CATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAG 1143 Query 63248 AGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63307 || ||| ||||| | || | || ||||| || || || || || || || Sbjct 1142 GGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCAGGCGGAC 1083 Query 63308 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63367 |||| | | | || | |||||||| || | ||| | ||| | | || || || Sbjct 1082 GAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTT 1023 Query 63368 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63427 || ||||| || | ||| | ||||||||||| | || | | ||| || | | Sbjct 1022 ACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAG 963 Query 63428 ACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCC 63466 |||||| || |||| || ||||||| ||| || || || Sbjct 962 ACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACC 924 >seq6928 Length=4025 Score = 98.7 bits (108), Expect = 1e-15 Identities = 189/279 (68%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 63188 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63247 ||||| || ||||| ||| || ||||| || || ||||| |||||||||||||||||||| Sbjct 2159 CATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAG 2218 Query 63248 AGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63307 || ||| ||||| | || | || ||||| || || || || || || || Sbjct 2219 GGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCAGGCGGAC 2278 Query 63308 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63367 |||| | | | || | |||||||| || | ||| | ||| | | || || || Sbjct 2279 GAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTT 2338 Query 63368 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63427 || ||||| || | ||| | ||||||||||| | || | | ||| || | | Sbjct 2339 ACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAG 2398 Query 63428 ACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCC 63466 |||||| || |||| || ||||||| ||| || || || Sbjct 2399 ACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACC 2437 >seq16698 Length=1832 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||||||||||||||| | ||| || ||||| ||||| || |||||||| | || Sbjct 1583 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 1524 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 ||||| || ||||| || |||| ||| || || || |||||||| || || || || Sbjct 1523 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 1464 Query 33438 AGCAAAGGCAATAAGTCTCTC 33458 |||||| |||| || | ||| Sbjct 1463 AGCAAAACCAATCAGGCGCTC 1443 >seq15817 Length=2130 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||||||||||||||| | ||| || ||||| ||||| || |||||||| | || Sbjct 783 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 842 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 ||||| || ||||| || |||| ||| || || || |||||||| || || || || Sbjct 843 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 902 Query 33438 AGCAAAGGCAATAAGTCTCTC 33458 |||||| |||| || | ||| Sbjct 903 AGCAAAACCAATCAGGCGCTC 923 >seq14616 Length=2520 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||||||||||||||| | ||| || ||||| ||||| || |||||||| | || Sbjct 782 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 841 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 ||||| || ||||| || |||| ||| || || || |||||||| || || || || Sbjct 842 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 901 Query 33438 AGCAAAGGCAATAAGTCTCTC 33458 |||||| |||| || | ||| Sbjct 902 AGCAAAACCAATCAGGCGCTC 922 >seq14479 Length=1290 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||||||||||||||| | ||| || ||||| ||||| || |||||||| | || Sbjct 816 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 757 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 ||||| || ||||| || |||| ||| || || || |||||||| || || || || Sbjct 756 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 697 Query 33438 AGCAAAGGCAATAAGTCTCTC 33458 |||||| |||| || | ||| Sbjct 696 AGCAAAACCAATCAGGCGCTC 676 >seq14382 Length=1200 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||||||||||||||| | ||| || ||||| ||||| || |||||||| | || Sbjct 371 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 430 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 ||||| || ||||| || |||| ||| || || || |||||||| || || || || Sbjct 431 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 490 Query 33438 AGCAAAGGCAATAAGTCTCTC 33458 |||||| |||| || | ||| Sbjct 491 AGCAAAACCAATCAGGCGCTC 511 >seq11483 Length=3389 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||||||||||||||| | ||| || ||||| ||||| || |||||||| | || Sbjct 1574 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 1515 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 ||||| || ||||| || |||| ||| || || || |||||||| || || || || Sbjct 1514 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 1455 Query 33438 AGCAAAGGCAATAAGTCTCTC 33458 |||||| |||| || | ||| Sbjct 1454 AGCAAAACCAATCAGGCGCTC 1434 >seq10572 Length=1138 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||||||||||||||| | ||| || ||||| ||||| || |||||||| | || Sbjct 383 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 442 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 ||||| || ||||| || |||| ||| || || || |||||||| || || || || Sbjct 443 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 502 Query 33438 AGCAAAGGCAATAAGTCTCTC 33458 |||||| |||| || | ||| Sbjct 503 AGCAAAACCAATCAGGCGCTC 523 >seq10016 Length=1858 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||||||||||||||| | ||| || ||||| ||||| || |||||||| | || Sbjct 1199 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 1140 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 ||||| || ||||| || |||| ||| || || || |||||||| || || || || Sbjct 1139 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 1080 Query 33438 AGCAAAGGCAATAAGTCTCTC 33458 |||||| |||| || | ||| Sbjct 1079 AGCAAAACCAATCAGGCGCTC 1059 >seq9418 Length=1914 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||||||||||||||| | ||| || ||||| ||||| || |||||||| | || Sbjct 1108 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 1049 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 ||||| || ||||| || |||| ||| || || || |||||||| || || || || Sbjct 1048 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 989 Query 33438 AGCAAAGGCAATAAGTCTCTC 33458 |||||| |||| || | ||| Sbjct 988 AGCAAAACCAATCAGGCGCTC 968 >seq7870 Length=1622 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||||||||||||||| | ||| || ||||| ||||| || |||||||| | || Sbjct 736 GTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGGGCATCACACC 795 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 ||||| || ||||| || |||| ||| || || || |||||||| || || || || Sbjct 796 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATACCCTCCACGGC 855 Query 33438 AGCAAAGGCAATAAGTCTCTC 33458 |||||| |||| || | ||| Sbjct 856 AGCAAAACCAATCAGGCGCTC 876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622812183981240