Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq15380 158 3e-33 seq10209 158 3e-33 seq6928 158 3e-33 >seq15380 Length=3290 Score = 158 bits (174), Expect = 3e-33 Identities = 504/769 (66%), Gaps = 16/769 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || |||||||| || || ||| ||| || || || | || || |||||| ||| Sbjct 568 TTTACCCACGCCACCCCTACCCTGTTCAACGCCGGTACCCCGAAGCCTCAGATGAGTTCC 627 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | ||||||||||| ||||| || || | ||||| || ||| | Sbjct 628 TGCTTCCTCGTGGCCATGAAGGACGACAGTATCGATGGCATTTACGACACCCTCAAGGAG 687 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGA--TCCACAATGTTCGTG 363724 || || || ||| || || || ||||| || || | | ||||| | || Sbjct 688 TGCGCCACCATCAGTAAGGCGGCCGGTGGTATTGG-GT-TCCACGTTCACAACATCCGCT 745 Query 363725 CACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 | |||||||| ||| || || ||| || || || || |||||||| | Sbjct 746 CTTCCGGTAGTTACATCGCCGGTACGAACGGTACCTCCAACGGTCTCGTGCCCATGCTCC 805 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 ||||||| | || || || | ||||| ||||||||||| || ||||| || || || | Sbjct 806 GTGTGTTCAATAACACCGCCCGCTACGTGGACCAGGGTGGCGGTAAGCGTAAGGGTGCCT 865 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-- 363902 | || |||| |||||||| || ||||| | || |||| | | | || ||| Sbjct 866 TCGCCGTGTACCTCGAGCCGTGGCACGCCGACGTGTTCGAGT---TCGTCCGCCTGAAGC 922 Query 363903 -AAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTG 363961 |||||| || || ||||| ||||| || |||||||| || || |||||| || ||| Sbjct 923 GAAACACCGGTAAGGAGGACCAACGTGCCCGCGATCTGTTTTACGCCCTTTGGATTCCTG 982 Query 363962 ACCATTTTATGAAGCGCGTGGAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAA 364020 | | || |||||||| || ||| ||| || | ||| | || | ||| ||| Sbjct 983 ATCTCTTCATGAAGCGTGTCAAGG-AGGAGGGACAGTGGACGCTGATGGACCCCAACGTG 1041 Query 364021 TGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTA-TACGAAAAGTATGA 364079 || |||| || ||| | || || || | | || | ||||| |||| || Sbjct 1042 TGCACAGGCCTGAGCGACTGCTACGGCGAGGAGT-TCGAGCGGAAGTACGAGGAGTACGA 1100 Query 364080 ATCGGAGGGAAAGGCTCGT-AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGG 364138 | | |||||| || ||| ||||| ||||| || ||| | | ||||||| ||| | Sbjct 1101 AAAGAAGGGAATGG-GCGTCAAGACGATTCCGGCGCAGGACTTGTGGTTTGAGATCCTCA 1159 Query 364139 ATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGT 364198 || |||| ||||| || || | ||| ||||||| || | |||||| || | Sbjct 1160 TGTCCCAGACCGAGACCGGCGTCCCTTTCATGCTGTACAAGGACGCCTGCAACAAGAAAT 1219 Query 364199 CCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAAT 364258 |||| ||| || | | ||||| || || ||| || || || |||||||| || | Sbjct 1220 CCAATCAGAAGAATTTGGGTACCATCAAGTGCTCCAATCTGTGCACGGAGATTATCGAGT 1279 Query 364259 ACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCT 364307 ||||| | || ||||| ||||| || ||||| || || ||||| || Sbjct 1280 ACACCTCCAAGGATGAGACCGCCGTCTGCAACCTCGCCTCCATCGCCCT 1328 >seq10209 Length=2565 Score = 158 bits (174), Expect = 3e-33 Identities = 504/769 (66%), Gaps = 16/769 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || |||||||| || || ||| ||| || || || | || || |||||| ||| Sbjct 741 TTTACCCACGCCACCCCTACCCTGTTCAACGCCGGTACCCCGAAGCCTCAGATGAGTTCC 800 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | ||||||||||| ||||| || || | ||||| || ||| | Sbjct 801 TGCTTCCTCGTGGCCATGAAGGACGACAGTATCGATGGCATTTACGACACCCTCAAGGAG 860 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGA--TCCACAATGTTCGTG 363724 || || || ||| || || || ||||| || || | | ||||| | || Sbjct 861 TGCGCCACCATCAGTAAGGCGGCCGGTGGTATTGG-GT-TCCACGTTCACAACATCCGCT 918 Query 363725 CACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 | |||||||| ||| || || ||| || || || || |||||||| | Sbjct 919 CTTCCGGTAGTTACATCGCCGGTACGAACGGTACCTCCAACGGTCTCGTGCCCATGCTCC 978 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 ||||||| | || || || | ||||| ||||||||||| || ||||| || || || | Sbjct 979 GTGTGTTCAATAACACCGCCCGCTACGTGGACCAGGGTGGCGGTAAGCGTAAGGGTGCCT 1038 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-- 363902 | || |||| |||||||| || ||||| | || |||| | | | || ||| Sbjct 1039 TCGCCGTGTACCTCGAGCCGTGGCACGCCGACGTGTTCGAGT---TCGTCCGCCTGAAGC 1095 Query 363903 -AAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTG 363961 |||||| || || ||||| ||||| || |||||||| || || |||||| || ||| Sbjct 1096 GAAACACCGGTAAGGAGGACCAACGTGCCCGCGATCTGTTTTACGCCCTTTGGATTCCTG 1155 Query 363962 ACCATTTTATGAAGCGCGTGGAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAA 364020 | | || |||||||| || ||| ||| || | ||| | || | ||| ||| Sbjct 1156 ATCTCTTCATGAAGCGTGTCAAGG-AGGAGGGACAGTGGACGCTGATGGACCCCAACGTG 1214 Query 364021 TGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTA-TACGAAAAGTATGA 364079 || |||| || ||| | || || || | | || | ||||| |||| || Sbjct 1215 TGCACAGGCCTGAGCGACTGCTACGGCGAGGAGT-TCGAGCGGAAGTACGAGGAGTACGA 1273 Query 364080 ATCGGAGGGAAAGGCTCGT-AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGG 364138 | | |||||| || ||| ||||| ||||| || ||| | | ||||||| ||| | Sbjct 1274 AAAGAAGGGAATGG-GCGTCAAGACGATTCCGGCGCAGGACTTGTGGTTTGAGATCCTCA 1332 Query 364139 ATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGT 364198 || |||| ||||| || || | ||| ||||||| || | |||||| || | Sbjct 1333 TGTCCCAGACCGAGACCGGCGTCCCTTTCATGCTGTACAAGGACGCCTGCAACAAGAAAT 1392 Query 364199 CCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAAT 364258 |||| ||| || | | ||||| || || ||| || || || |||||||| || | Sbjct 1393 CCAATCAGAAGAATTTGGGTACCATCAAGTGCTCCAATCTGTGCACGGAGATTATCGAGT 1452 Query 364259 ACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCT 364307 ||||| | || ||||| ||||| || ||||| || || ||||| || Sbjct 1453 ACACCTCCAAGGATGAGACCGCCGTCTGCAACCTCGCCTCCATCGCCCT 1501 >seq6928 Length=4025 Score = 158 bits (174), Expect = 3e-33 Identities = 504/769 (66%), Gaps = 16/769 (2%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || |||||||| || || ||| ||| || || || | || || |||||| ||| Sbjct 2620 TTTACCCACGCCACCCCTACCCTGTTCAACGCCGGTACCCCGAAGCCTCAGATGAGTTCC 2561 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | ||||||||||| ||||| || || | ||||| || ||| | Sbjct 2560 TGCTTCCTCGTGGCCATGAAGGACGACAGTATCGATGGCATTTACGACACCCTCAAGGAG 2501 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGA--TCCACAATGTTCGTG 363724 || || || ||| || || || ||||| || || | | ||||| | || Sbjct 2500 TGCGCCACCATCAGTAAGGCGGCCGGTGGTATTGG-GT-TCCACGTTCACAACATCCGCT 2443 Query 363725 CACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 | |||||||| ||| || || ||| || || || || |||||||| | Sbjct 2442 CTTCCGGTAGTTACATCGCCGGTACGAACGGTACCTCCAACGGTCTCGTGCCCATGCTCC 2383 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 ||||||| | || || || | ||||| ||||||||||| || ||||| || || || | Sbjct 2382 GTGTGTTCAATAACACCGCCCGCTACGTGGACCAGGGTGGCGGTAAGCGTAAGGGTGCCT 2323 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-- 363902 | || |||| |||||||| || ||||| | || |||| | | | || ||| Sbjct 2322 TCGCCGTGTACCTCGAGCCGTGGCACGCCGACGTGTTCGAGT---TCGTCCGCCTGAAGC 2266 Query 363903 -AAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTG 363961 |||||| || || ||||| ||||| || |||||||| || || |||||| || ||| Sbjct 2265 GAAACACCGGTAAGGAGGACCAACGTGCCCGCGATCTGTTTTACGCCCTTTGGATTCCTG 2206 Query 363962 ACCATTTTATGAAGCGCGTGGAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAA 364020 | | || |||||||| || ||| ||| || | ||| | || | ||| ||| Sbjct 2205 ATCTCTTCATGAAGCGTGTCAAGG-AGGAGGGACAGTGGACGCTGATGGACCCCAACGTG 2147 Query 364021 TGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTA-TACGAAAAGTATGA 364079 || |||| || ||| | || || || | | || | ||||| |||| || Sbjct 2146 TGCACAGGCCTGAGCGACTGCTACGGCGAGGAGT-TCGAGCGGAAGTACGAGGAGTACGA 2088 Query 364080 ATCGGAGGGAAAGGCTCGT-AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGG 364138 | | |||||| || ||| ||||| ||||| || ||| | | ||||||| ||| | Sbjct 2087 AAAGAAGGGAATGG-GCGTCAAGACGATTCCGGCGCAGGACTTGTGGTTTGAGATCCTCA 2029 Query 364139 ATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGT 364198 || |||| ||||| || || | ||| ||||||| || | |||||| || | Sbjct 2028 TGTCCCAGACCGAGACCGGCGTCCCTTTCATGCTGTACAAGGACGCCTGCAACAAGAAAT 1969 Query 364199 CCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAAT 364258 |||| ||| || | | ||||| || || ||| || || || |||||||| || | Sbjct 1968 CCAATCAGAAGAATTTGGGTACCATCAAGTGCTCCAATCTGTGCACGGAGATTATCGAGT 1909 Query 364259 ACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCT 364307 ||||| | || ||||| ||||| || ||||| || || ||||| || Sbjct 1908 ACACCTCCAAGGATGAGACCGCCGTCTGCAACCTCGCCTCCATCGCCCT 1860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303064052259098