Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq15740 100 2e-16 seq7780 100 2e-16 seq6241 100 2e-16 seq6220 96.9 3e-15 seq12843 82.4 6e-11 >seq15740 Length=2267 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 |||||||| |||||||| || ||||||||||| || | || | | ||||||| || Sbjct 1860 TGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGC 1919 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || |||| || ||||| ||||| ||| | |||||| ||||| || | | Sbjct 1920 TTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTC 1979 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | ||||||| | |||| || | || || || || |||||| Sbjct 1980 GCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTC 2039 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || |||||||| Sbjct 2040 AGCGTCTTCACGAAGATCTGCAT 2062 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/204 (71%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 |||||||| |||||||| || ||||||||||| || | || | | ||||||| || Sbjct 1631 TGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGC 1690 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || |||| || ||||| ||||| ||| | |||||| ||||| || | | Sbjct 1691 TTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTC 1750 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTC-CACGGTGATGGTTTTTCCGGT 16911 |||||| | | | ||||||| | |||| || | || || || || ||||| Sbjct 1751 GCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGGAGGGCAATCGTCTTGCCGGT 1810 Query 16912 CAGCGTTTTGACAAAAATCTGCAT 16935 |||||| || || || |||||||| Sbjct 1811 CAGCGTCTTCACGAAGATCTGCAT 1834 >seq7780 Length=1467 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 |||||||| |||||||| || ||||||||||| || | || | | ||||||| || Sbjct 344 TGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGC 285 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || |||| || ||||| ||||| ||| | |||||| ||||| || | | Sbjct 284 TTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTC 225 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | ||||||| | |||| || | || || || || |||||| Sbjct 224 GCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTC 165 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || |||||||| Sbjct 164 AGCGTCTTCACGAAGATCTGCAT 142 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 |||||||| |||||||| || ||||||||||| || | || | | ||||||| || Sbjct 801 TGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGC 742 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || |||| || ||||| ||||| ||| | |||||| ||||| || | | Sbjct 741 TTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTC 682 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | ||||||| | |||| || | || || || || |||||| Sbjct 681 GCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTC 622 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || |||||||| Sbjct 621 AGCGTCTTCACGAAGATCTGCAT 599 Score = 98.7 bits (108), Expect = 8e-16 Identities = 145/204 (71%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG-TCCTCCAATTG 16791 |||||||| |||||||| || ||||||||||| || | || ||| ||||||| || Sbjct 573 TGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCCGGCCCTCCTCCAGCTG 514 Query 16792 TTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTG 16851 ||||| || |||| || ||||| ||||| ||| | |||||| ||||| || | Sbjct 513 CTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTT 454 Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911 | |||||| | | | ||||||| | |||| || | || || || || ||||| Sbjct 453 CGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGT 394 Query 16912 CAGCGTTTTGACAAAAATCTGCAT 16935 |||||| || || || |||||||| Sbjct 393 CAGCGTCTTCACGAAGATCTGCAT 370 >seq6241 Length=2159 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 |||||||| |||||||| || ||||||||||| || | || | | ||||||| || Sbjct 1702 TGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGC 1761 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || |||| || ||||| ||||| ||| | |||||| ||||| || | | Sbjct 1762 TTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTC 1821 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | ||||||| | |||| || | || || || || |||||| Sbjct 1822 GCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTC 1881 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || |||||||| Sbjct 1882 AGCGTCTTCACGAAGATCTGCAT 1904 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/204 (71%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 |||||||| |||||||| || ||||||||||| || | || | | ||||||| || Sbjct 1930 TGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGC 1989 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || |||| || ||||| ||||| ||| | |||||| ||||| || | | Sbjct 1990 TTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTC 2049 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | ||||||| | |||| || | || || || || |||||| Sbjct 2050 GCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTC 2109 Query 16913 AGCGTTTTGACAAAAATCT-GCAT 16935 ||||| || || || |||| |||| Sbjct 2110 AGCGTCTTCACGAAGATCTAGCAT 2133 >seq6220 Length=1461 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 |||||||| |||||||| || ||||||||||| || | || | | ||||||| || Sbjct 613 TGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGC 672 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || |||| || ||||| ||||| ||| | |||||| ||||| || | | Sbjct 673 TTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTC 732 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | ||||||| | |||| || | || || || || ||||| Sbjct 733 GCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTT 792 Query 16913 AGCGTTTTGACAAAAATCTGCATTTT 16938 | || || |||||||||||||| || Sbjct 793 AAAGTCTTCACAAAAATCTGCATGTT 818 >seq12843 Length=905 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || |||||||||||||| | ||| | | ||||| | || Sbjct 418 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCGAGCTGC 477 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || || | || || ||||| |||||| || | || || ||||| || || Sbjct 478 TTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTG 537 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | ||||||| || ||| || | || |||||| || |||| Sbjct 538 GC--CTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGG 595 Query 16911 TCAGCGTTTTGACAAAAATCTGCATT 16936 | || || || || |||||||||||| Sbjct 596 TGAGGGTCTTCACGAAAATCTGCATT 621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405002397183610