Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq15380 107 2e-18 seq10209 107 2e-18 seq6928 107 2e-18 seq6220 96.9 3e-15 seq10875 89.7 4e-13 >seq15380 Length=3290 Score = 107 bits (118), Expect = 2e-18 Identities = 267/405 (66%), Gaps = 3/405 (1%) Strand=Plus/Minus Query 129990 CATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACCCACAG 130049 ||||| ||||| ||| ||| | | ||| || ||||| || | ||| || | ||| || Sbjct 1029 CATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAG 970 Query 130050 GGCGTACAACAAATCTCGCGCTTTTCTATCCTCGGCACCCATGTTACGTTTCAGTTCAAG 130109 |||||| |||| ||| || || | ||||| ||| |||| || ||||| | Sbjct 969 GGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCAGGCGGAC 910 Query 130110 GAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTT 130169 ||| ||| | | ||||||||||||||| || | || | || | || ||||| || || Sbjct 909 GAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTT 850 Query 130170 ---GCCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAA 130226 ||| || ||||| |||| ||| ||| || ||| | || || | ||| | | | | Sbjct 849 ACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAG 790 Query 130227 TCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAACGTTATGAAC 130286 ||||||| || ||||| || | | ||| |||| || || || | ||| ||||| Sbjct 789 ACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACCGGAAGAGCGGATGTTGTGAAC 730 Query 130287 GCTTAGACCTATGCCGCCGCCAAATTTTGATATCAACGCGCAATCGCGTAGCGTTTCATA 130346 | | || || || ||| | || || ||||| || || || || || Sbjct 729 GTGGAACCCAATACCACCGGCCGCCTTACTGATGGTGGCGCACTCCTTGAGGGTGTCGTA 670 Query 130347 AATGCCAACGATACTGTCTTCTTTAATGTTTAGGAGGAAACACGA 130391 ||||||| |||||||||| || || ||| | |||||| || || Sbjct 669 AATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAGGA 625 >seq10209 Length=2565 Score = 107 bits (118), Expect = 2e-18 Identities = 267/405 (66%), Gaps = 3/405 (1%) Strand=Plus/Minus Query 129990 CATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACCCACAG 130049 ||||| ||||| ||| ||| | | ||| || ||||| || | ||| || | ||| || Sbjct 1202 CATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAG 1143 Query 130050 GGCGTACAACAAATCTCGCGCTTTTCTATCCTCGGCACCCATGTTACGTTTCAGTTCAAG 130109 |||||| |||| ||| || || | ||||| ||| |||| || ||||| | Sbjct 1142 GGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCAGGCGGAC 1083 Query 130110 GAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTT 130169 ||| ||| | | ||||||||||||||| || | || | || | || ||||| || || Sbjct 1082 GAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTT 1023 Query 130170 ---GCCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAA 130226 ||| || ||||| |||| ||| ||| || ||| | || || | ||| | | | | Sbjct 1022 ACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAG 963 Query 130227 TCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAACGTTATGAAC 130286 ||||||| || ||||| || | | ||| |||| || || || | ||| ||||| Sbjct 962 ACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACCGGAAGAGCGGATGTTGTGAAC 903 Query 130287 GCTTAGACCTATGCCGCCGCCAAATTTTGATATCAACGCGCAATCGCGTAGCGTTTCATA 130346 | | || || || ||| | || || ||||| || || || || || Sbjct 902 GTGGAACCCAATACCACCGGCCGCCTTACTGATGGTGGCGCACTCCTTGAGGGTGTCGTA 843 Query 130347 AATGCCAACGATACTGTCTTCTTTAATGTTTAGGAGGAAACACGA 130391 ||||||| |||||||||| || || ||| | |||||| || || Sbjct 842 AATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAGGA 798 >seq6928 Length=4025 Score = 107 bits (118), Expect = 2e-18 Identities = 267/405 (66%), Gaps = 3/405 (1%) Strand=Plus/Plus Query 129990 CATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACCCACAG 130049 ||||| ||||| ||| ||| | | ||| || ||||| || | ||| || | ||| || Sbjct 2159 CATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAG 2218 Query 130050 GGCGTACAACAAATCTCGCGCTTTTCTATCCTCGGCACCCATGTTACGTTTCAGTTCAAG 130109 |||||| |||| ||| || || | ||||| ||| |||| || ||||| | Sbjct 2219 GGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCAGGCGGAC 2278 Query 130110 GAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTT 130169 ||| ||| | | ||||||||||||||| || | || | || | || ||||| || || Sbjct 2279 GAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTT 2338 Query 130170 ---GCCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAA 130226 ||| || ||||| |||| ||| ||| || ||| | || || | ||| | | | | Sbjct 2339 ACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAG 2398 Query 130227 TCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAACGTTATGAAC 130286 ||||||| || ||||| || | | ||| |||| || || || | ||| ||||| Sbjct 2399 ACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACCGGAAGAGCGGATGTTGTGAAC 2458 Query 130287 GCTTAGACCTATGCCGCCGCCAAATTTTGATATCAACGCGCAATCGCGTAGCGTTTCATA 130346 | | || || || ||| | || || ||||| || || || || || Sbjct 2459 GTGGAACCCAATACCACCGGCCGCCTTACTGATGGTGGCGCACTCCTTGAGGGTGTCGTA 2518 Query 130347 AATGCCAACGATACTGTCTTCTTTAATGTTTAGGAGGAAACACGA 130391 ||||||| |||||||||| || || ||| | |||||| || || Sbjct 2519 AATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAGGA 2563 >seq6220 Length=1461 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| |||||||| || ||||||||||| || ||| | | || || ||||| | Sbjct 818 AACATGCAGATTTTTGTGAAGACTTTAACCGGCAAGACGATTGCCCTCGAGGTGGAGGCG 759 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||| || | || | | || || || || ||||||||||| ||||| || || Sbjct 758 AGCGACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGAC 699 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || || || || || || ||||| ||| | ||||| |||||| || | || ||| Sbjct 698 CAGCAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTAC 639 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || || || | || | || | || ||||||| ||| Sbjct 638 AACATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGCGGCGGT 588 >seq10875 Length=435 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||||||||| || || || || ||||| || || || ||||| Sbjct 422 AAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAGCAGCGTCTCATTTTCGCTGGCAAG 363 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | ||||| |||||| || | || |||||||| || || || |||||| | || Sbjct 362 CAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAACATCCAGAAGGAGTCCACCCTCCAC 303 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | || | || ||||||| ||| Sbjct 302 CTCGTGCTCCGCCTGCGCGGTGGT 279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419639303472535