Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq12843 141 2e-28 seq7780 140 8e-28 seq6241 138 3e-27 seq15740 134 3e-26 seq6220 131 4e-25 seq10875 91.5 3e-13 >seq12843 Length=905 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || ||||| || | ||| || || ||||| || ||||||||| Sbjct 394 CCACCGCGCAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 453 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || |||||||| |||||||| || ||| Sbjct 454 AGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 513 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || || || ||||| || || | ||||| | || || Sbjct 514 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACC 573 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| | ||| ||||| ||||| || ||||| ||||| ||||||||| Sbjct 574 TCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCATT 621 >seq7780 Length=1467 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || ||||| || | ||| || || ||||| || ||||| ||| Sbjct 368 CCGCCGCGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 309 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || ||||| || || ||||| || | || Sbjct 308 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGA 249 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||||| |||||||| || || | ||||||| || || Sbjct 248 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 189 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | |||||||| |||||||| ||||| ||||| |||||||| Sbjct 188 TCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 142 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || ||||| || | ||| || || ||||| || ||||| ||||||||||| || || Sbjct 810 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCC 751 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || ||||| || || ||||| || | || || || || || ||| Sbjct 750 TCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 691 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| ||||| |||||||| || || | ||||||| || || ||||| | |||||| Sbjct 690 TGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTC 631 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| ||||| ||||| |||||||| Sbjct 630 TTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 599 >seq6241 Length=2159 Score = 138 bits (152), Expect = 3e-27 Identities = 168/228 (74%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || ||||| || | ||| || || ||||| || ||||| ||| Sbjct 1906 CCGCCGCGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 1965 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || ||||| || |||||||| || | || Sbjct 1966 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGA 2025 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||||| |||||||| || || | ||||||| || || Sbjct 2026 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 2085 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCT-GCAT 288473 ||||| | |||||||| |||||||| ||||| ||||| |||| |||| Sbjct 2086 TCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTAGCAT 2133 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || ||||| || | ||| || || ||||| || ||||| ||||||||||| || || Sbjct 1693 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCC 1752 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || ||||| || || ||||| || | || || || || || ||| Sbjct 1753 TCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 1812 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| ||||| |||||||| || || | ||||||| || || ||||| | |||||| Sbjct 1813 TGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTC 1872 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| ||||| ||||| |||||||| Sbjct 1873 TTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 1904 >seq15740 Length=2267 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || ||||| || | ||| || || ||||| || ||||| ||||||||||| || || Sbjct 1851 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCC 1910 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || ||||| || || ||||| || | || || || || || ||| Sbjct 1911 TCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 1970 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| ||||| |||||||| || || | ||||||| || || ||||| | |||||| Sbjct 1971 TGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTC 2030 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| ||||| ||||| |||||||| Sbjct 2031 TTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 2062 Score = 129 bits (142), Expect = 1e-24 Identities = 157/213 (74%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || ||||| || | ||| || || ||||| || ||||| ||||||||||| || || Sbjct 1622 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCC 1681 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || ||||| || || ||||| || | || || || || || ||| Sbjct 1682 TCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 1741 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTC-GAGCGTGATCGT 288440 ||||| ||||| |||||||| || || | ||||||| || || || ||| | ||||| Sbjct 1742 TGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGGAGGGCAATCGT 1801 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| |||||||| ||||| ||||| |||||||| Sbjct 1802 CTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 1834 Score = 111 bits (122), Expect = 4e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || ||||| || | ||| || || ||||| || ||||| ||| Sbjct 2064 CCGCCGCGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 2123 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || ||||| || || ||||| || | || Sbjct 2124 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGGGGA 2183 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||||| |||||||| || || | ||||||| || || Sbjct 2184 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 2243 Query 288427 TCGAGCGTGATCGTCTTCCCGGTC 288450 ||||| | |||||||| |||||| Sbjct 2244 TCGAGGGCAATCGTCTTGCCGGTC 2267 >seq6220 Length=1461 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || ||||| || | ||| || || ||||| || ||||| ||| Sbjct 589 CCGCCGCGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 648 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || ||||| || || ||||| || | || Sbjct 649 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGA 708 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||||| |||||||| || || | ||||||| || || Sbjct 709 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 768 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | |||||||| ||||| | |||||| || || |||||||| Sbjct 769 TCGAGGGCAATCGTCTTGCCGGTTAAAGTCTTCACAAAAATCTGCAT 815 Score = 109 bits (120), Expect = 1e-18 Identities = 163/229 (71%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || ||||| || | ||| || || ||||| || ||||| ||| Sbjct 147 CCGCCGCGCAG-CGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 205 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCT--GTTGAGAATCTG 288364 |||||||| || || || | || || || ||||| || || || | | || || Sbjct 206 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGCCGNTCCGCTGGTCGCGTG 265 Query 288365 GGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTA 288424 | | ||| || ||||||| ||||| |||||||| || || | ||||||| || | Sbjct 266 GACTGCCTCCT---GCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCA 322 Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||||| | |||||||| |||||||| ||||| ||||| |||||||| Sbjct 323 CCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 371 >seq10875 Length=435 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || ||||| || | ||| || || ||||| || ||||| ||| Sbjct 280 CCACCGCGCAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCG 339 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || ||||| || |||||||| || | || Sbjct 340 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGGGGA 399 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || || || |||||||| ||||| |||||||| Sbjct 400 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179392332770842