Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq15740 122 9e-23 seq7780 122 9e-23 seq6241 122 9e-23 seq6220 120 3e-22 seq12843 105 7e-18 seq13950 100 3e-16 seq10841 100 3e-16 >seq15740 Length=2267 Score = 122 bits (134), Expect = 9e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || |||||||| |||||||| Sbjct 1871 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 1930 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 1931 AATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 1990 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||||||| ||||| |||| | || || ||||| || |||||||| || Sbjct 1991 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCAC 2050 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 2051 GAAGATCTGCAT 2062 Score = 114 bits (126), Expect = 1e-20 Identities = 142/193 (74%), Gaps = 1/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || |||||||| |||||||| Sbjct 1642 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 1701 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 1702 AATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 1761 Query 42137 CGCCACCGTGTCGCTCGATTCCACATC-GACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||||||||| ||||| || || | || || ||||| || |||||||| | Sbjct 1762 CTCGATCGTGTCGCTCGCCTCCACCTCGGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCA 1821 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 1822 CGAAGATCTGCAT 1834 Score = 96.9 bits (106), Expect = 4e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || |||||||| |||||||| Sbjct 2099 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 2158 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 2159 AATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 2218 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184 | | | ||||||||||| ||||| |||| | || || ||||| || Sbjct 2219 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGT 2266 >seq7780 Length=1467 Score = 122 bits (134), Expect = 9e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || |||||||| |||||||| Sbjct 333 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 274 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 273 AATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 214 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||||||| ||||| |||| | || || ||||| || |||||||| || Sbjct 213 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCAC 154 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 153 GAAGATCTGCAT 142 Score = 122 bits (134), Expect = 9e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || |||||||| |||||||| Sbjct 790 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 731 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 730 AATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 671 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||||||| ||||| |||| | || || ||||| || |||||||| || Sbjct 670 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCAC 611 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 610 GAAGATCTGCAT 599 Score = 120 bits (132), Expect = 3e-22 Identities = 143/193 (74%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGT-CCGCTCGTCATCTAGCTGCTTACCAGCGA 42075 |||||| || || ||||| || || || || ||| | || || |||||||| ||||||| Sbjct 562 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCCGGCCCTCCTCCAGCTGCTTGCCAGCGA 503 Query 42076 ATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG 42135 | ||||| ||||||||||| | || | || |||||||||| ||| || || | Sbjct 502 AAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGT 443 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 || | | ||||||||||| ||||| |||| | || || ||||| || |||||||| | Sbjct 442 TCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCA 383 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 382 CGAAGATCTGCAT 370 >seq6241 Length=2159 Score = 122 bits (134), Expect = 9e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || |||||||| |||||||| Sbjct 1713 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 1772 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 1773 AATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 1832 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||||||| ||||| |||| | || || ||||| || |||||||| || Sbjct 1833 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCAC 1892 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 1893 GAAGATCTGCAT 1904 Score = 114 bits (126), Expect = 1e-20 Identities = 137/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || |||||||| |||||||| Sbjct 1941 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 2000 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 2001 AATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 2060 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||||||| ||||| |||| | || || ||||| || |||||||| || Sbjct 2061 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCAC 2120 Query 42197 AAAGAT 42202 ||||| Sbjct 2121 GAAGAT 2126 >seq6220 Length=1461 Score = 120 bits (132), Expect = 3e-22 Identities = 144/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || |||||||| |||||||| Sbjct 624 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 683 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 684 AATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 743 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||||||||| ||||| |||| | || || ||||| |||| ||||| || Sbjct 744 CTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTTAAAGTCTTCAC 803 Query 42197 AAAGATTTGCATTTTC 42212 ||| || ||||| ||| Sbjct 804 AAAAATCTGCATGTTC 819 Score = 89.7 bits (98), Expect = 6e-13 Identities = 138/194 (71%), Gaps = 5/194 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || |||||||| |||||||| Sbjct 181 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 240 Query 42077 TATGAGTCGCT--GCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGC 42134 ||||| || | |||||||| ||| || ||||| || ||| || || | Sbjct 241 AATGAGCCGNTCCGCTGGTCGCGTGGACTGC-CTCCTG--CCTGGATCTTCGCCTTCACG 297 Query 42135 GTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 || | | ||||||||||| ||||| |||| | || || ||||| || |||||||| Sbjct 298 TTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTC 357 Query 42195 ACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 358 ACGAAGATCTGCAT 371 >seq12843 Length=905 Score = 105 bits (116), Expect = 7e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || ||||||||||||||||| Sbjct 429 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAA 488 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | ||||||||| ||| || |||| | Sbjct 489 GATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 548 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||||| | || || |||| | |||||| || || || || ||||| || Sbjct 549 CTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCAC 608 Query 42197 AAAGATTTGCATT 42209 || || |||||| Sbjct 609 GAAAATCTGCATT 621 >seq13950 Length=980 Score = 100 bits (110), Expect = 3e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || || ||||| || || || || || | || || ||||||||||||||||| Sbjct 518 CTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAA 459 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | ||||||||| ||| || |||| | Sbjct 458 GATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 399 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||||| | || || |||| | |||||| || || || || ||||| || Sbjct 398 CTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCAC 339 Query 42197 AAAGATTTGCATT 42209 || || |||||| Sbjct 338 GAAAATCTGCATT 326 >seq10841 Length=1634 Score = 100 bits (110), Expect = 3e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || || ||||| || || || || || | || || ||||||||||||||||| Sbjct 410 CTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAA 351 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | ||||||||| ||| || |||| | Sbjct 350 GATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 291 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||||| | || || |||| | |||||| || || || || ||||| || Sbjct 290 CTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCAC 231 Query 42197 AAAGATTTGCATT 42209 || || |||||| Sbjct 230 GAAAATCTGCATT 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543095065415760