Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq15380 214 2e-50 seq10209 214 2e-50 seq6928 214 2e-50 >seq15380 Length=3290 Score = 214 bits (236), Expect = 2e-50 Identities = 307/430 (71%), Gaps = 2/430 (0%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 |||||||| |||||||||||||| || |||||| ||| |||||| ||| || ||||| Sbjct 577 GCCACCCCTACCCTGTTCAACGCCGGTACCCCGAAGCCTCAGATGAGTTCCTGCTTCCTC 636 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 || | | |||| |||| ||| || |||| ||||| ||||||||| || || ||| Sbjct 637 GTGGCCATGAAGGACGACAGTATCGATGGCATTTACGACACCCTCAAGGAGTGCGCCACC 696 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||| || || || || || ||| || || ||| || | || | ||| Sbjct 697 ATCAGTAAGGCGGCCGGTGGTATTGGGTTCCACGTTCACAACATCCGCTCTTCCGGTAGT 756 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 |||||| |||||| || || ||||||||||| ||||| || |||||||| || ||||| Sbjct 757 TACATCGCCGGTACGAACGGTACCTCCAACGGTCTCGTGCCCATGCTCCGTGTGTTCAAT 816 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || |||||||||||||||||||| || | | | |||||| | ||||| || || Sbjct 817 AACACCGCCCGCTACGTGGACCAGGGTGGCGGTAAGCGTAAGGGTGCCTTCGCCGTGTAC 876 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCA-CGGCAA 94250 |||||||| |||||||| |||||| | ||| || |||| | ||| || ||| || Sbjct 877 CTCGAGCCGTGGCACGCCGACGTGTTCGAGTTCGTCCGCCTG-AAGCGAAACACCGGTAA 935 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || | | ||| | || || || ||||| || ||| | || || || || ||||| Sbjct 936 GGAGGACCAACGTGCCCGCGATCTGTTTTACGCCCTTTGGATTCCTGATCTCTTCATGAA 995 Query 94311 ACGCGTCGAG 94320 || ||| || Sbjct 996 GCGTGTCAAG 1005 Score = 102 bits (112), Expect = 8e-17 Identities = 193/284 (68%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| | || || |||| ||||||||||| |||||||| | ||||| || || |||||| Sbjct 1765 AACTCCCTCCTCCTGGCGCCCATGCCCACCGCCTCCACCTCTCAGATTCTGGGTAACAAC 1824 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 |||| ||||| |||||||| || ||| | ||| | | || ||||| ||| || ||| Sbjct 1825 GAGTGCTTCGAGCCCTTCACGTCGAACATTTACGTCCGTCGTGTGCTGAGCGGTGAGTTC 1884 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAG 95268 || || | |||||| | ||| | |||||| | | ||||| || || Sbjct 1885 CCGGTGGTGAACAAGTATCTCGTGATGGACCTCATCAAGCGCAACCTGTGGAACGATGAG 1944 Query 95269 GTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAG 95328 || ||| || | | | ||||||||||||| | || || || || Sbjct 1945 ATCCGTAACGAAATCATCACCTTCAACGGCTCCGTCGCTGGTGTGGCGGGTATCCCCGAC 2004 Query 95329 GACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 |||||||||| ||||||| ||||||||||||||| | ||||| Sbjct 2005 GACATCAAGGAGCTCTACCGCACCGTGTGGGAGATCTCCCAGCG 2048 >seq10209 Length=2565 Score = 214 bits (236), Expect = 2e-50 Identities = 307/430 (71%), Gaps = 2/430 (0%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 |||||||| |||||||||||||| || |||||| ||| |||||| ||| || ||||| Sbjct 750 GCCACCCCTACCCTGTTCAACGCCGGTACCCCGAAGCCTCAGATGAGTTCCTGCTTCCTC 809 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 || | | |||| |||| ||| || |||| ||||| ||||||||| || || ||| Sbjct 810 GTGGCCATGAAGGACGACAGTATCGATGGCATTTACGACACCCTCAAGGAGTGCGCCACC 869 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||| || || || || || ||| || || ||| || | || | ||| Sbjct 870 ATCAGTAAGGCGGCCGGTGGTATTGGGTTCCACGTTCACAACATCCGCTCTTCCGGTAGT 929 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 |||||| |||||| || || ||||||||||| ||||| || |||||||| || ||||| Sbjct 930 TACATCGCCGGTACGAACGGTACCTCCAACGGTCTCGTGCCCATGCTCCGTGTGTTCAAT 989 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || |||||||||||||||||||| || | | | |||||| | ||||| || || Sbjct 990 AACACCGCCCGCTACGTGGACCAGGGTGGCGGTAAGCGTAAGGGTGCCTTCGCCGTGTAC 1049 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCA-CGGCAA 94250 |||||||| |||||||| |||||| | ||| || |||| | ||| || ||| || Sbjct 1050 CTCGAGCCGTGGCACGCCGACGTGTTCGAGTTCGTCCGCCTG-AAGCGAAACACCGGTAA 1108 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || | | ||| | || || || ||||| || ||| | || || || || ||||| Sbjct 1109 GGAGGACCAACGTGCCCGCGATCTGTTTTACGCCCTTTGGATTCCTGATCTCTTCATGAA 1168 Query 94311 ACGCGTCGAG 94320 || ||| || Sbjct 1169 GCGTGTCAAG 1178 >seq6928 Length=4025 Score = 214 bits (236), Expect = 2e-50 Identities = 307/430 (71%), Gaps = 2/430 (0%) Strand=Plus/Minus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 |||||||| |||||||||||||| || |||||| ||| |||||| ||| || ||||| Sbjct 2611 GCCACCCCTACCCTGTTCAACGCCGGTACCCCGAAGCCTCAGATGAGTTCCTGCTTCCTC 2552 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 || | | |||| |||| ||| || |||| ||||| ||||||||| || || ||| Sbjct 2551 GTGGCCATGAAGGACGACAGTATCGATGGCATTTACGACACCCTCAAGGAGTGCGCCACC 2492 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||| || || || || || ||| || || ||| || | || | ||| Sbjct 2491 ATCAGTAAGGCGGCCGGTGGTATTGGGTTCCACGTTCACAACATCCGCTCTTCCGGTAGT 2432 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 |||||| |||||| || || ||||||||||| ||||| || |||||||| || ||||| Sbjct 2431 TACATCGCCGGTACGAACGGTACCTCCAACGGTCTCGTGCCCATGCTCCGTGTGTTCAAT 2372 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || |||||||||||||||||||| || | | | |||||| | ||||| || || Sbjct 2371 AACACCGCCCGCTACGTGGACCAGGGTGGCGGTAAGCGTAAGGGTGCCTTCGCCGTGTAC 2312 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCA-CGGCAA 94250 |||||||| |||||||| |||||| | ||| || |||| | ||| || ||| || Sbjct 2311 CTCGAGCCGTGGCACGCCGACGTGTTCGAGTTCGTCCGCCTG-AAGCGAAACACCGGTAA 2253 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || | | ||| | || || || ||||| || ||| | || || || || ||||| Sbjct 2252 GGAGGACCAACGTGCCCGCGATCTGTTTTACGCCCTTTGGATTCCTGATCTCTTCATGAA 2193 Query 94311 ACGCGTCGAG 94320 || ||| || Sbjct 2192 GCGTGTCAAG 2183 Score = 102 bits (112), Expect = 8e-17 Identities = 193/284 (68%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| | || || |||| ||||||||||| |||||||| | ||||| || || |||||| Sbjct 1423 AACTCCCTCCTCCTGGCGCCCATGCCCACCGCCTCCACCTCTCAGATTCTGGGTAACAAC 1364 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 |||| ||||| |||||||| || ||| | ||| | | || ||||| ||| || ||| Sbjct 1363 GAGTGCTTCGAGCCCTTCACGTCGAACATTTACGTCCGTCGTGTGCTGAGCGGTGAGTTC 1304 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAG 95268 || || | |||||| | ||| | |||||| | | ||||| || || Sbjct 1303 CCGGTGGTGAACAAGTATCTCGTGATGGACCTCATCAAGCGCAACCTGTGGAACGATGAG 1244 Query 95269 GTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAG 95328 || ||| || | | | ||||||||||||| | || || || || Sbjct 1243 ATCCGTAACGAAATCATCACCTTCAACGGCTCCGTCGCTGGTGTGGCGGGTATCCCCGAC 1184 Query 95329 GACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 |||||||||| ||||||| ||||||||||||||| | ||||| Sbjct 1183 GACATCAAGGAGCTCTACCGCACCGTGTGGGAGATCTCCCAGCG 1140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494615974930440