Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq15380 120 3e-22 seq10209 120 3e-22 seq6928 120 3e-22 >seq15380 Length=3290 Score = 120 bits (132), Expect = 3e-22 Identities = 340/515 (66%), Gaps = 13/515 (3%) Strand=Plus/Plus Query 123211 ACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACG 123270 |||| | | || ||| |||| ||||||| || || | ||||||| ||| || ||| Sbjct 773 ACGGTACCTCCAACGGTCTCGTGCCCATGCTCCGTGTGTTCAATAACACCGCCCGCTACG 832 Query 123271 TCGACCAGGGCGGC---AAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACG 123327 | |||||||| ||| || || || || || | || | || || || |||||||||| Sbjct 833 TGGACCAGGGTGGCGGTAAGCGTAAGGGTGCCTTCGCCGTGTACCTCGAGCCGTGGCACG 892 Query 123328 TTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCC 123387 || |||| ||| || | | || || |||| || ||| || | |||| Sbjct 893 CCGACGTGTTCGAGTTCGTCCGCCTGAAGCGAAACACCGGTAAGGAGGACCAACGTGCCC 952 Query 123388 GCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACG 123447 ||||| |||| ||||| | ||| | || ||| | || ||| || || || || || | Sbjct 953 GCGATCTGTTTTACGCCCTTTGGATTCCTGATCTCTTCATGAAGCGTGTCAAGGAGGAGG 1012 Query 123448 GCGTGTGGTCGCTCATGTGTCCCGATCG-GTGTCCCGGCTTGAGCGACGTTTACGGCAAT 123506 | |||| |||| ||| | ||| | || ||| | ||| |||||||| |||||| | Sbjct 1013 GACAGTGGACGCTGATG-GACCCCAACGTGTGCACAGGCCTGAGCGACTGCTACGGCGAG 1071 Query 123507 CAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAG-GTTAGTCAGGTTCC 123565 |||| || | ||||| | | ||||| ||||| || | || | | |||| Sbjct 1072 GAGTTCGAGCGGAAGTACGAGGAGTACGAAAA-GAAGGGAATGGGCGTCAAGACGATTCC 1130 Query 123566 GGCACGTGATTTGTTCAAATTTATTATCGAAA---CACAAGTCGAAACCGGAACGCCGTA 123622 ||| | || |||| ||| ||| | | || ||| ||||| || | Sbjct 1131 GGCGCAGGACTTGTGG---TTTGAGATCCTCATGTCCCAGACCGAGACCGGCGTCCCTTT 1187 Query 123623 CATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAA 123682 |||||| ||||| ||||||||||||| |||| ||||||||| || ||||| || || || Sbjct 1188 CATGCTGTACAAGGACGCCTGCAACAAGAAATCCAATCAGAAGAATTTGGGTACCATCAA 1247 Query 123683 ATGTAGTAATCTTTGCTCCGAAATTATCGAATACA 123717 || ||||| ||| | || |||||||| |||| Sbjct 1248 GTGCTCCAATCTGTGCACGGAGATTATCGAGTACA 1282 >seq10209 Length=2565 Score = 120 bits (132), Expect = 3e-22 Identities = 340/515 (66%), Gaps = 13/515 (3%) Strand=Plus/Plus Query 123211 ACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACG 123270 |||| | | || ||| |||| ||||||| || || | ||||||| ||| || ||| Sbjct 946 ACGGTACCTCCAACGGTCTCGTGCCCATGCTCCGTGTGTTCAATAACACCGCCCGCTACG 1005 Query 123271 TCGACCAGGGCGGC---AAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACG 123327 | |||||||| ||| || || || || || | || | || || || |||||||||| Sbjct 1006 TGGACCAGGGTGGCGGTAAGCGTAAGGGTGCCTTCGCCGTGTACCTCGAGCCGTGGCACG 1065 Query 123328 TTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCC 123387 || |||| ||| || | | || || |||| || ||| || | |||| Sbjct 1066 CCGACGTGTTCGAGTTCGTCCGCCTGAAGCGAAACACCGGTAAGGAGGACCAACGTGCCC 1125 Query 123388 GCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACG 123447 ||||| |||| ||||| | ||| | || ||| | || ||| || || || || || | Sbjct 1126 GCGATCTGTTTTACGCCCTTTGGATTCCTGATCTCTTCATGAAGCGTGTCAAGGAGGAGG 1185 Query 123448 GCGTGTGGTCGCTCATGTGTCCCGATCG-GTGTCCCGGCTTGAGCGACGTTTACGGCAAT 123506 | |||| |||| ||| | ||| | || ||| | ||| |||||||| |||||| | Sbjct 1186 GACAGTGGACGCTGATG-GACCCCAACGTGTGCACAGGCCTGAGCGACTGCTACGGCGAG 1244 Query 123507 CAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAG-GTTAGTCAGGTTCC 123565 |||| || | ||||| | | ||||| ||||| || | || | | |||| Sbjct 1245 GAGTTCGAGCGGAAGTACGAGGAGTACGAAAA-GAAGGGAATGGGCGTCAAGACGATTCC 1303 Query 123566 GGCACGTGATTTGTTCAAATTTATTATCGAAA---CACAAGTCGAAACCGGAACGCCGTA 123622 ||| | || |||| ||| ||| | | || ||| ||||| || | Sbjct 1304 GGCGCAGGACTTGTGG---TTTGAGATCCTCATGTCCCAGACCGAGACCGGCGTCCCTTT 1360 Query 123623 CATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAA 123682 |||||| ||||| ||||||||||||| |||| ||||||||| || ||||| || || || Sbjct 1361 CATGCTGTACAAGGACGCCTGCAACAAGAAATCCAATCAGAAGAATTTGGGTACCATCAA 1420 Query 123683 ATGTAGTAATCTTTGCTCCGAAATTATCGAATACA 123717 || ||||| ||| | || |||||||| |||| Sbjct 1421 GTGCTCCAATCTGTGCACGGAGATTATCGAGTACA 1455 >seq6928 Length=4025 Score = 120 bits (132), Expect = 3e-22 Identities = 340/515 (66%), Gaps = 13/515 (3%) Strand=Plus/Minus Query 123211 ACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACG 123270 |||| | | || ||| |||| ||||||| || || | ||||||| ||| || ||| Sbjct 2415 ACGGTACCTCCAACGGTCTCGTGCCCATGCTCCGTGTGTTCAATAACACCGCCCGCTACG 2356 Query 123271 TCGACCAGGGCGGC---AAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACG 123327 | |||||||| ||| || || || || || | || | || || || |||||||||| Sbjct 2355 TGGACCAGGGTGGCGGTAAGCGTAAGGGTGCCTTCGCCGTGTACCTCGAGCCGTGGCACG 2296 Query 123328 TTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCC 123387 || |||| ||| || | | || || |||| || ||| || | |||| Sbjct 2295 CCGACGTGTTCGAGTTCGTCCGCCTGAAGCGAAACACCGGTAAGGAGGACCAACGTGCCC 2236 Query 123388 GCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACG 123447 ||||| |||| ||||| | ||| | || ||| | || ||| || || || || || | Sbjct 2235 GCGATCTGTTTTACGCCCTTTGGATTCCTGATCTCTTCATGAAGCGTGTCAAGGAGGAGG 2176 Query 123448 GCGTGTGGTCGCTCATGTGTCCCGATCG-GTGTCCCGGCTTGAGCGACGTTTACGGCAAT 123506 | |||| |||| ||| | ||| | || ||| | ||| |||||||| |||||| | Sbjct 2175 GACAGTGGACGCTGATG-GACCCCAACGTGTGCACAGGCCTGAGCGACTGCTACGGCGAG 2117 Query 123507 CAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAG-GTTAGTCAGGTTCC 123565 |||| || | ||||| | | ||||| ||||| || | || | | |||| Sbjct 2116 GAGTTCGAGCGGAAGTACGAGGAGTACGAAAA-GAAGGGAATGGGCGTCAAGACGATTCC 2058 Query 123566 GGCACGTGATTTGTTCAAATTTATTATCGAAA---CACAAGTCGAAACCGGAACGCCGTA 123622 ||| | || |||| ||| ||| | | || ||| ||||| || | Sbjct 2057 GGCGCAGGACTTGTGG---TTTGAGATCCTCATGTCCCAGACCGAGACCGGCGTCCCTTT 2001 Query 123623 CATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAA 123682 |||||| ||||| ||||||||||||| |||| ||||||||| || ||||| || || || Sbjct 2000 CATGCTGTACAAGGACGCCTGCAACAAGAAATCCAATCAGAAGAATTTGGGTACCATCAA 1941 Query 123683 ATGTAGTAATCTTTGCTCCGAAATTATCGAATACA 123717 || ||||| ||| | || |||||||| |||| Sbjct 1940 GTGCTCCAATCTGTGCACGGAGATTATCGAGTACA 1906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451905233956440