Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000442575.2_202013-07-31] 17,339 sequences; 34,103,807 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq15740 136 4e-27 seq7780 136 4e-27 seq6241 136 4e-27 seq6220 123 3e-23 seq12843 105 8e-18 seq13950 96.9 4e-15 seq10841 96.9 4e-15 seq10875 84.2 2e-11 >seq15740 Length=2267 Score = 136 bits (150), Expect = 4e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| |||||||| | || ||||| | || || Sbjct 1853 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 1912 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||| ||||| || | |||||||||||| | || | || |||||||||| Sbjct 1913 CAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTG 1972 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||||| ||| | || | | ||||||||||| ||||| || | | || || || Sbjct 1973 GATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTT 2032 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| |||||||| || || ||||| ||||| Sbjct 2033 GCCGGTCAGCGTCTTCACGAAGATCTGCAT 2062 Score = 129 bits (142), Expect = 7e-25 Identities = 156/211 (74%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| |||||||| | || ||||| | || || Sbjct 1624 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 1683 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||| ||||| || | |||||||||||| | || | || |||||||||| Sbjct 1684 CAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTG 1743 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATC-CACCGTGATGGTTT 46562 ||||||| ||| | || | | ||||||||||| ||||| || | | || || | Sbjct 1744 GATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGGAGGGCAATCGTCT 1803 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||||| || || ||||| ||||| Sbjct 1804 TGCCGGTCAGCGTCTTCACGAAGATCTGCAT 1834 Score = 113 bits (124), Expect = 5e-20 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| |||||||| | || ||||| | || || Sbjct 2081 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 2140 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||| ||||| || | |||||||||||| | || | || |||||||||| Sbjct 2141 CAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTG 2200 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||||| ||| | || | | ||||||||||| ||||| || | | || || || Sbjct 2201 GATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTT 2260 Query 46564 GCCCGTC 46570 ||| ||| Sbjct 2261 GCCGGTC 2267 >seq7780 Length=1467 Score = 136 bits (150), Expect = 4e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| |||||||| | || ||||| | || || Sbjct 351 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 292 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||| ||||| || | |||||||||||| | || | || |||||||||| Sbjct 291 CAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTG 232 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||||| ||| | || | | ||||||||||| ||||| || | | || || || Sbjct 231 GATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTT 172 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| |||||||| || || ||||| ||||| Sbjct 171 GCCGGTCAGCGTCTTCACGAAGATCTGCAT 142 Score = 136 bits (150), Expect = 4e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| |||||||| | || ||||| | || || Sbjct 808 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 749 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||| ||||| || | |||||||||||| | || | || |||||||||| Sbjct 748 CAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTG 689 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||||| ||| | || | | ||||||||||| ||||| || | | || || || Sbjct 688 GATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTT 629 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| |||||||| || || ||||| ||||| Sbjct 628 GCCGGTCAGCGTCTTCACGAAGATCTGCAT 599 Score = 129 bits (142), Expect = 7e-25 Identities = 156/211 (74%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGC-GCTCGTCGT 46442 ||| || |||| || |||||| ||||| |||||||| | || |||| | | || | Sbjct 580 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCCGGCCCTCCT 521 Query 46443 CGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCA 46502 | ||||||||||| ||||| || | |||||||||||| | || | || |||||||||| Sbjct 520 CCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCT 461 Query 46503 TGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||| | || | | ||||||||||| ||||| || | | || || | Sbjct 460 GGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCT 401 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||||| || || ||||| ||||| Sbjct 400 TGCCGGTCAGCGTCTTCACGAAGATCTGCAT 370 >seq6241 Length=2159 Score = 136 bits (150), Expect = 4e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| |||||||| | || ||||| | || || Sbjct 1695 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 1754 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||| ||||| || | |||||||||||| | || | || |||||||||| Sbjct 1755 CAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTG 1814 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||||| ||| | || | | ||||||||||| ||||| || | | || || || Sbjct 1815 GATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTT 1874 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| |||||||| || || ||||| ||||| Sbjct 1875 GCCGGTCAGCGTCTTCACGAAGATCTGCAT 1904 Score = 125 bits (138), Expect = 8e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| |||||||| | || ||||| | || || Sbjct 1923 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 1982 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||| ||||| || | ||||||||||| | || | || |||||||||| Sbjct 1983 CAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTG 2042 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||||| ||| | || | | ||||||||||| ||||| || | | || || || Sbjct 2043 GATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTT 2102 Query 46564 GCCCGTCAGCGTTTTAACAAAGAT 46587 ||| |||||||| || || ||||| Sbjct 2103 GCCGGTCAGCGTCTTCACGAAGAT 2126 >seq6220 Length=1461 Score = 123 bits (136), Expect = 3e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| |||||||| | || ||||| | || || Sbjct 606 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 665 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||| ||||| || | |||||||||||| | || | || |||||||||| Sbjct 666 CAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTG 725 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||||| ||| | || | | ||||||||||| ||||| || | | || || || Sbjct 726 GATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTCTT 785 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 ||| || | || || ||||| || ||||| || Sbjct 786 GCCGGTTAAAGTCTTCACAAAAATCTGCATGTT 818 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/212 (71%), Gaps = 5/212 (2%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| |||||||| | || ||||| | || || Sbjct 163 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 222 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCT--GCTGGTCGGCCGGCACGCTCTCCTTGTCC 46501 ||||||||||| ||||| || | || | ||||||| || | || ||||| || Sbjct 223 CAGCTGCTTGCCAGCGAAAATGAGCCGNTCCGCTGGTC-GCGTGGACTGCCTCCT--GCC 279 Query 46502 ATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTT 46561 ||||||| ||| | || | | ||||||||||| ||||| || | | || || Sbjct 280 TGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCAATCGTC 339 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| |||||||| || || ||||| ||||| Sbjct 340 TTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 371 >seq12843 Length=905 Score = 105 bits (116), Expect = 8e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| | || ||||||||||| || ||||| Sbjct 429 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAA 488 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | ||||||||| |||||| ||||| | Sbjct 489 GATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 548 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||||| | || || || | | |||||| || || || || || || || Sbjct 549 CTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCAC 608 Query 46582 AAAGATTTGCATT 46594 || || |||||| Sbjct 609 GAAAATCTGCATT 621 >seq13950 Length=980 Score = 96.9 bits (106), Expect = 4e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| |||||||| | || ||||| | || ||||||||||| || ||||| Sbjct 518 CTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAA 459 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | ||||||||| |||||| ||||| | Sbjct 458 GATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 399 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||||| | || || || | | |||||| || || || || || || || Sbjct 398 CTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCAC 339 Query 46582 AAAGATTTGCATT 46594 || || |||||| Sbjct 338 GAAAATCTGCATT 326 >seq10841 Length=1634 Score = 96.9 bits (106), Expect = 4e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| |||||||| | || ||||| | || ||||||||||| || ||||| Sbjct 410 CTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAA 351 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | ||||||||| |||||| ||||| | Sbjct 350 GATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 291 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||||| | || || || | | |||||| || || || || || || || Sbjct 290 CTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCAC 231 Query 46582 AAAGATTTGCATT 46594 || || |||||| Sbjct 230 GAAAATCTGCATT 218 >seq10875 Length=435 Score = 84.2 bits (92), Expect = 2e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | || ||||| | || || ||||||||||| ||||| Sbjct 315 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 374 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTC 46510 || | ||||||||||| | || | | |||||||||| ||||||| Sbjct 375 AATGAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTC 423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565115891642280